Oryza sativa japonica (Japanese rice): 4342449
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Entry
4342449 CDS
T01015
Symbol
FIL1, OsYAB1, OsYABBY1, YAB1
Name
(RefSeq) protein YABBY 1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4342449 (FIL1)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
4342449 (FIL1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_12
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
4342449
NCBI-ProteinID:
NP_001389953
LinkDB
All DBs
Position
7:join(3281770..3281838,3284772..3284891,3285093..3285216,3285687..3285735,3287702..3287777,3288532..3288603)
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AA seq
169 aa
AA seq
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MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQ
DHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFI
KEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGGGSN
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccagtttacatcggagcatgtttgctatgtcaactgcaactattgcaacact
atccttgtggtgaatgtgccaaacaattgttcctacaacattgtgactgttagatgtggg
cattgcacaatggtgctctccatggatcttgctccttttcaccaagcacgcactgttcaa
gatcaccaggtacagaacagaggatttcaaggtaataactttggaagctatgacatagct
tccagaaatcagaggacatcgacagccatgtacccaatgccaaccagtcagcagcaagtg
tcacctatacgtccccctgagaaaagacagcgtgtcccatctgcatacaacagattcatc
aaggaggagatacagaggattaaaaccagcaatcctgagattagccacagggaggcattc
agtgctgctgcaaagaactgggctcatcttccccggctccattttggcctcagcgtcgcc
gacggcggcggcggcggcggcagcaactaa
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integrated database retrieval system
