KEGG T01015: 4342469

Oryza sativa japonica (Japanese rice): 4342469

Entry

4342469           CDS       T01015

Name

(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03083

Polycomb repressive complex

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    4342469
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:osa01002]
    4342469
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4342469
Enzymes [BR:osa01000]
3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     4342469
Peptidases and inhibitors [BR:osa01002]
Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   4342469
Ubiquitin system [BR:osa04121]
Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    4342469

SSDB

Motif

Pfam:

USP7_ICP0_bdg UCH USP7_C2 MATH_2 MATH UCH_1 RA_2 ubiquitin pP_pnuc_2 Malt_amylase_C SASP

Other DBs

NCBI-GeneID:

4342469

NCBI-ProteinID:

XP_015647293

LinkDB

Position

7:join(3473028..3473063,3473377..3473452,3473879..3474026,3474132..3474289,3474368..3474633,3474715..3474933,3475030..3475138,3475219..3475334,3475879..3475977,3476157..3476266,3476476..3476550,3477302..3477380,3477458..3477604,3477680..3477760,3477870..3477989,3478475..3478597,3479277..3479354,3479481..3479569,3479655..3479763,3479861..3479929,3480012..3480122,3480452..3480507,3480592..3480769,3480866..3480967,3481055..3481126,3481245..3481310,3481397..3481462,3481571..3481654,3482533..3482649,3483648..3483722,3483807..3483890,3484033..3484074)

AA seq 1119 aa
MTTSPPPPPPAEQQQQQEEEEVLVPRQELPNGTQPMEVVPSEPAATVENQQIEDPPISRF
TWTIENLSRVSTKKLYSEIFVVGGYKWRILIFPRGNNVEYLSMYLDVADSAVLPYGWTRY
AQFSLSVVNQMHNKFTIRKETQHQFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEA
EVAVCKVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDM
PSGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDKM
KGTVVEGTIQQLFEGHHMNYIECINVDMKSTRKESFYDLQLDVKGCQDVYASFDKYVEVE
RLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPIQL
DLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVT
KEDAKRALEEQYGGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
IAEHLRIRLEKDREEKERRKKEKAEAHLYTIIKVARDDDLTTQIGKDIYFDLVDHDKVPS
FRIQKQMPFTQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEETHTVGQLKE
AANKAHNAELKLFLEVELGLDLKPLPLPDKTREDILLFFKLYDPEKEQLRYVGRLFVKAS
GKPQDILPKLRKMAGFSQDEEIELYEEIKFEPNVMCEYIDNRLLFRACQLEDGDIVCFQK
SPKPDTADQYRYPDVPSFLVYIRNRQVVHFRSLEKPKEDDFCLEMSKAFTYDEVVEKVAQ
KLGVDDPTKIRLTSHNCYSQQPKPQPIKYRGVERLLDMLIHYNQTSDILYYEVLDIPLPE
LQALKTLKVTYHHGTKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPNAELRLLEVFYH
KIYKIFAPNEKIENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNFG
EPFFMVIREDETLSSIKERIQKKLKVPDEDFSKWKFAYISLGRPDYFEDSDTVASRFQRN
MYGAWEQYLGLEHPDTAPRKTHNANQNRHSFERPVKIYN

NT seq 3360 nt +upstreamnt +downstreamnt
atgacgacctctcccccgccaccgccgcccgccgagcagcagcagcaacaggaggaagag
gaggtgctcgtgccgcgccaggagttgcccaacggaacgcagccaatggaagttgtgcct
tctgagccagccgccactgtggaaaaccagcagattgaagatccaccaatctctagattt
acttggaccattgagaacctatcaagagtgagcacaaagaaactctactctgaaattttt
gttgttgggggctacaagtggcggattttgattttcccaaggggaaataatgttgaatat
ctgtctatgtatttggatgtggctgattcagcagtcctgccttatgggtggactagatat
gcgcagttcagcctctctgtggtcaatcaaatgcacaacaagtttacaataagaaaagaa
acacaacatcaattctctgctcgagaaagtgattggggttttacttcctttatgcctttg
ggtgatctctacaaccccagtagaggctatcttgtaaatgatacttgtatagtggaggcc
gaagttgctgtatgtaaggtggttgattattggagctatgactctaaaaaggaaactggt
tatgttggtctgaaaaatcaaggtgctacttgctatatgaattctcttcttcagactctg
taccatattccatatttcagaaaggctgtttatcatatgcccacaactgagaatgacatg
ccttcgggaagcattccattagctctgcaaagtctcttttataagctgcagtataatgac
agcagtgtctctacaaaggaactcacaaaatcttttgggtgggacatgcacgattcattc
atgcaacatgatgtgcaagaactaaatagagttctttctgagaagttggaagataagatg
aagggaactgttgtggagggcacaatacaacaattatttgaagggcatcacatgaattat
atcgagtgtatcaatgtggatatgaaatcaactagaaaggaatccttctatgatcttcag
cttgatgtcaaaggttgtcaggatgtctatgcttcttttgataagtatgtagaggtggag
cgcctggaaggagataacaagtatcacgcagaacaatatggactgcaggatgcaaagaaa
ggtgttcttttcatcgacttccctcctgttttgcaacttcagctaaaacgctttgaatat
gatttcatgcgtgatacaatggtaaagataaatgaccgctatgagttcccgattcagttg
gatcttgatagagatgatggaaagtacctctctccagatgcagataggaatgtgcggaat
ctttacactcttcacagtgttctcgtccatagtgggggtgttcatggtgggcattactat
gctttcatacggcctactctttctgatcagtggtttaagtttgatgatgagcgtgtaaca
aaagaggatgcaaagagggcattggaagagcaatatggtggtgaggaggagctacctcag
actaatcctggtctaaacaatactcctttcaagttcactaaatattcaaacgcatacatg
cttgtgtacattcgcgaaagtgacaaggacaaaataatttgtaacgtggatgagaaggac
atagcagagcaccttcgaattagattagaaaaggatcgtgaggaaaaggagcgtcgaaag
aaggagaaagctgaggcccacctatatactatcattaaggttgcaagggatgatgacttg
accactcaaatagggaaggacatatattttgatcttgttgatcatgataaggtcccaagt
ttccgcatccagaagcagatgcctttcactcaattcaaggaggaggttgcaaaagagttt
ggtattcctacccaatttcaaagattttggctgtgggccaagcgacaaaaccatacatac
cggcctaaccgtccactgactcctcaagaagagacgcacacagttggacagctaaaagaa
gcagcaaataaggctcataacgcagaactaaaattgttcttggaggttgaacttggactg
gaccttaaacctcttcctctgcctgacaagaccagagaagatatattgcttttcttcaaa
ctctatgatcctgaaaaggaacaactgcggtatgttggtaggctctttgttaaggcttcg
ggaaaacctcaggacattctgccaaaactgaggaaaatggctggtttttcacaggatgag
gaaattgaactttatgaggaaatcaagtttgagcccaatgtaatgtgtgaatatattgac
aataggcttctatttcgagcttgccagcttgaagatggtgacatcgtttgttttcaaaaa
tctccaaagccagatactgctgaccaatatagataccctgatgtcccatcctttctggtg
tatatacggaaccggcaggtagtccattttcgttcattggagaagcccaaagaggatgat
ttttgtttagagatgtcgaaggctttcacgtatgatgaagtagtggaaaaggtggctcaa
aaacttggtgttgatgacccaactaaaattcggcttacatcgcataactgttattctcaa
caacctaaacctcaacctattaaatacagaggtgttgagcgtttgctggacatgctgatt
cactataaccagacttctgatattctttactatgaagtattggatataccactcccagaa
ttacaagctctgaagacattaaaagttacatatcatcatggcacaaaagatgaggtgtca
gttcacagtattaggttgccaaagaacagcactgtcggtgatgtgctaaatgatataaaa
tcaaaggttgagctgtctcatcctaatgctgagcttagactacttgaggttttctatcac
aagatatacaagatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactgg
accctgcgtgcagaggaggttccggaggaagagaaaaatcttggtccttttgatcgcttg
attcatgtataccattttaccaaagacactcaaaatcagacgcaagttcagaactttgga
gaacctttctttatggttattcgtgaggatgaaaccctttcttctattaaagaacggata
cagaaaaaactaaaagttccagatgaggatttctcaaagtggaaatttgcctacatatca
cttggtcgcccagattattttgaggattcagacactgtagcttcaagatttcagcgaaac
atgtatggagcttgggagcaatatcttggactggagcatccagacacggctcctagaaag
acacacaacgctaatcagaaccgccattcatttgagagacctgtaaagatctataactag

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