Oryza sativa japonica (Japanese rice): 4342553
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Entry
4342553 CDS
T01015
Name
(RefSeq) RuvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4342553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4342553
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
osa03037
]
4342553
Enzymes [BR:
osa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4342553
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
4342553
Chromatin remodeling factors
SRCAP complex
4342553
INO80 complex
4342553
INO80 complex (yeast)
4342553
SWR1 complex
4342553
ASTRA complex
4342553
Cilium and associated proteins [BR:
osa03037
]
Motile cilia and associated proteins
Dynein assembly factors
4342553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
Cdc6_lid
DnaB_C
bpMoxR
AAA_18
AAA_25
Raco_middle
Motif
Other DBs
NCBI-GeneID:
4342553
NCBI-ProteinID:
XP_015647533
UniProt:
B7FAF4
A0A8J8XNX4
LinkDB
All DBs
Position
7:complement(join(4211683..4211772,4211925..4211994,4212214..4212305,4212383..4212482,4212614..4212720,4212945..4213010,4213121..4213255,4213895..4214050,4214355..4214504,4214668..4214799,4215846..4216034,4216181..4216261))
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AA seq
455 aa
AA seq
DB search
MRIEEVQSTTKKQRIATHTHIKGLGLDANGAAIGLAAGFVGQGAAREAAGLVVDMIRQKK
MAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEEAESTTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL
IKEKVSVGDVIYIEANSGAVKRVGRCDAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTL
HDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQEINKVVNRYIDEGIAELVPGVLF
IDEVHMLDIECFSYLNRALESPLSPIVILATNRGICNVRGTDMTSPHGIPVDLLDRLVII
RTETYGPTEMIQILAIRAQVEEIDIDEESLAFLGEIGQQTSLRHAIQLLSPASVVAKANG
REKISKADLEEVSALYLDAKSSARLLQEQQGRYIT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgaggaggtgcagtcgacgacgaagaagcagaggatcgcgacgcacacccac
ataaagggcctcggcctcgacgcgaatggggcggcgatagggttggcggcggggttcgtg
gggcagggggcggcgagggaggctgccgggctggtggtcgacatgattcgccagaagaag
atggccgggcgcgcgctgcttctcgccggcccgcccgccaccggcaagacggctctcgct
ctcggcatctcccaggagctcggtagtaaggtccctttctgtcctatggtaggatcagaa
gtgtattcctcagaggtcaagaaaactgaggtgctaatggagaatttccgtagagctata
ggtttgcgtataaaagaaaataaagaggtctacgaaggagaggttactgaactttcccca
gaagaggctgagagtacaacaggtggatatggaaaaagcattagccatgtaatcataggt
ctgaagactgtaaaagggactaagcaactgaagctagatcctacaatttatgatgcttta
ataaaggaaaaggtgtcagtgggtgatgttatatacattgaagctaatagtggtgcggtc
aaaagagttggtagatgtgatgcttttgctacagaatacgatcttgaagctgaggagtat
gttccaatccccaaaggggaggtccataagaagaaggaaatagtgcaggatgttacgctt
catgaccttgatgctgcaaatgctcaaccacaaggaggccaagatattttgtcccttatg
ggacagatgatgaagccacggaaaactgaaatcactgagaagctacgacaagaaatcaat
aaggtggttaacagatatattgatgaaggaattgctgagcttgtacctggtgttctgttc
attgacgaggtccacatgttagacattgaatgcttctcttatcttaatcgtgctttggag
agcccattatcaccaattgtgatacttgctacgaacagaggaatatgtaacgtaagagga
actgatatgacaagtccacatggtataccagttgatcttctagacagattggtgattatt
cgaacagaaacatatggtcccactgagatgatccagatacttgctattagagcgcaggtg
gaagagattgacattgatgaagaaagtctcgcatttttaggagagattggacaacagaca
tctttgaggcatgctattcagttgctatcacccgccagtgtagttgcaaaggctaatggg
agagagaagatcagcaaggccgatcttgaggaagtcagtgctctgtatttggacgctaaa
tcatcggctcgtctccttcaggagcagcaaggaagatacattacttaa
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