KEGG   Oryza sativa japonica (Japanese rice): 4342644
Entry
4342644           CDS       T01015                                 
Name
(RefSeq) ras-related protein RABE1d isoform X1
  KO
K07901  Ras-related protein Rab-8A
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4342644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4342644
   03036 Chromosome and associated proteins [BR:osa03036]
    4342644
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4342644
   04031 GTP-binding proteins [BR:osa04031]
    4342644
Membrane trafficking [BR:osa04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    4342644
 Autophagy
  Other autophagy associated proteins
    4342644
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    4342644
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4342644
  Exosomal proteins of other body fluids (saliva and urine)
   4342644
  Exosomal proteins of colorectal cancer cells
   4342644
GTP-binding proteins [BR:osa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    4342644
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA FeoB_N SRPRB AAA_7 AAA_29 MCM AAA_16 PduV-EutP AAA_5 AAA_22 ABC_tran EIF_2_alpha
Other DBs
NCBI-GeneID: 4342644
NCBI-ProteinID: XP_015647321
UniProt: Q6ZKZ4 B7EW63
LinkDB
Position
7:complement(join(5206773..5206853,5206934..5207029,5207155..5207217,5207302..5207396,5207472..5207537,5208105..5208205,5208295..5208367,5209813..5209885))
AA seq 215 aa
MAGAPSRSRGDFDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD
GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRL
TETVAAAAEPPTIQISRQEPDQAAASSRWSACCNT
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcgggggctccgtcgaggtcgcgcggcgacttcgaccacctcatcaagctcctcctc
atcggcgacagcggagtaggaaagagttgcttgcttctgaggttctcagatgacactttc
actacaagttttatcaccaccattggcattgatttcaaggttcggacagttgagcttgat
ggaaagcgtgtaaaattgcagatttgggatactgctggtcaagaacgtttccggacaatt
acaactgcctactatagaggtgctatgggcattctgcttgtttatgatgttacagacgag
tcatccttcaacaacattagaaattggatccgcaacatagaacaacatgcatctgataat
gtcaacaagattttggtgggcaacaaggttgatatggatacaaagcgggtggtgtccaca
gctcaaggacaaaagctcgcagatgagtatggaatgaaattttttgagacgagtgcaaaa
acaaatcagaacgtggagcaggtattctttaccattgcaagggacataaagcaaagattg
accgaaactgttgctgcagcagctgagcccccaactattcaaatcagtaggcaagaacca
gatcaggcagctgcctcgtcaagatggtcagcctgctgtaacacctga

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