KEGG   Oryza sativa japonica (Japanese rice): 4342673
Entry
4342673           CDS       T01015                                 
Name
(RefSeq) rRNA biogenesis protein RRP5
  KO
K14792  rRNA biogenesis protein RRP5
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4342673
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    4342673
SSDB
Motif
Pfam: S1_RRP5 S1 OB_RRP5_4th OB_RRP5 Spt6_S1 Suf HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N HAT_Syf1_CNRKL1_C NRDE-2
Other DBs
NCBI-GeneID: 4342673
NCBI-ProteinID: XP_015647230
LinkDB
Position
7:join(5614156..5614354,5614467..5614672,5616556..5616696,5616845..5617021,5617121..5617217,5617647..5617759,5617846..5617968,5618076..5618147,5619412..5619504,5619636..5619746,5619839..5619961,5620906..5621094,5621212..5621286,5621490..5621626,5621791..5621925,5623101..5623240,5623406..5623471,5623804..5623910,5623982..5624062,5624136..5624210,5624296..5624397,5625909..5626077,5626162..5626289,5626668..5626751,5626851..5626951,5627801..5627954,5628036..5628110,5628184..5628334,5628535..5629150,5629499..5629559,5629946..5630091,5630176..5630359,5630435..5630533,5630675..5631003,5631095..5631271,5631643..5631739,5631814..5631969,5632034..5632270,5632343..5632426,5632863..5632970)
AA seq 1905 aa
MAPRGDGKKGKGSGKPDQLRPKSKQFKKHSRKEEVAGEGEQQERPAAPDSAAVLAAAAAD
DGDFPRGGRSLLSRDEVAEARAEADADFEREERRGKRKRKGASSSGAGGDDDLGSLFGGA
TTGKLPRFANRVTLKNISPNMKLWGVVIEVNQKDIVVSLPGGMRGFVRSEEVHDITSQET
RKDSEGSICADVVHVGQLVPCIVLRVDDDNKEGKVNKRVWLSLRLSRIYKGLSLDAIQDG
MVLTAQVKSIEDHGYILHFGVSSFSGFMPKADRESAKIESGQLIQCVVKAIDKAREIVHL
SSDEDLLSKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFTGTADIFNLSN
SFPSGSWKDDYIKNKKVNARILFVDPSTRAVGLTLNQQLLRLKVPSINVKAGEIYDKARV
LRMDKRAGLFLEIPSPTPSPGFVSIHDVSDKDVKNVEKKFKEGSMARVRVLGVRHLEGVA
IGTLKESAFEGSVFTHADVKPGMVVRAKVVTVEPFGAIVQFSSGVKALCPLPHMSELEHV
VKPPKKFKVGVELTFRVLGCKSKRITVTFKKSLVKSKLDVLASYADAKIGLLTHGWITKI
EKHGCFVKFYNGVQGFVSRSELGLEPGTEAENVYHVGQVVKCRVVSVVPASRKINVTFLI
STNRVIQADTPKVGSIVSGVVERLTPAAVVVSVNGFCKGSILNEHLADHRGQAAQLKNLL
KPGHEFSELLVLDVEGQNLVLSAKQSLINCASDIPSEISQMHAGSVFHGYVCNIIEAGCF
VRFLGHLTGFSPKDKAVDRSVEKLSNAFYVGQSVRSHILNVNAESARVKLSLQQSMCSSA
DCSFVQGYFLLDQKITELKYSDPSSSFHDWLNTFAIGNLVEGEVGAIEEYGVILNFQSHP
DVVGLIEHHQLGDSSVEVGSSVKGLVIDLSDGVVNISLKSELVRSVSKVGKKKKRHRAAV
MDLELHEEVNAIVEIVKESHVVLSIPEYNYAIGFAPLMDYNSQLLPCCNYENGQRITVVV
GSMPSSGPTGRLLLLPKASGKNSSVSSSKRAKKKSDFKVGSLVEAEIIDIKPLELLLKFG
SNLHGRIHITEVFDDDSNDCPFSELQIGRSVQARIVAEAEHSGKGGKNSKWELSIRPSLL
QGGLEDFTPPKAELRHSIGGIVHAYVVKVDREWIWLTVSRDVMAHLFILDSSAEPGELEK
FQQRYSVGQAVKGRIIGVNREKRLLRLKALDSQSLPENIGETQKPLSATVEHTKQGDIIG
GRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQEPISGFHEGQFVKCKVLDVSRSSE
GSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDLCPGTEVKGYVKSVNSKGCFI
MVSRTIEARIILSNLSDEYVENPQNDFPVGLLVHGRVLSSEPQSGKVEVSLRKNTGSKSQ
KSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVALCHVSELSDEPVLDIHSCHKA
GDKVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDDEDDEIVPEEISRNPVMGRDRNH
ALVLPKPESRASVLPLQVSLDESEGSDQENDNKGQEIANGTEVDDKKSNKRLKEKARKQR
ELEISALEERALQRDIPQTPDEFEKLVRSSPNSSFVWINYMAFLLDLADVDKARAVAERA
LRTINIREEEEKLNVWVAYFNLENEYGSPREDAVKKIFQRALQYCDPKKVHLALLAMYER
TEQYTLADELLDRMTKRFKTSCKIWLRCIQLSLKQSKDVECIKLIVKRALLSLPQSKRRK
FLSQTAILEFKCGVPEEGRSRFELILREYPKRTDLWSVYLDQEIRLGDTEIIRALFERVT
CLSLPPKKMKFLFKKYLEYEKSQGDEERIEHVKQKALEYVQSSLA
NT seq 5718 nt   +upstreamnt  +downstreamnt
atggcgccgcgcggcgacgggaagaaggggaagggatcggggaagcccgaccagctgcgc
cctaagagtaagcagttcaaaaagcactcgcgcaaggaggaggtggcgggtgagggggag
cagcaggagcgtccggcggccccggactccgccgccgtcctcgccgccgccgccgcagac
gacggcgacttcccgagaggagggcgtagcctgctgagcagggatgaggtggcggaggcg
cgcgcggaggcggacgcggacttcgagagagaggagaggaggggaaagaggaagaggaag
ggtgcatcctcgtcgggagccggtggcgacgacgacctggggagcctcttcggcggggct
accaccgggaagctcccacgcttcgctaatcgcgtcaccttaaagaatatttcaccaaat
atgaagctatggggtgttgtaattgaagttaaccaaaaagacattgttgtaagtctacct
ggtggaatgagagggtttgttcgatcagaggaagtgcatgacattacttcgcaagaaact
cgtaaggatagtgagggcagtatatgtgcagatgttgttcatgttgggcagctcgttcct
tgtatagttttaagagttgatgatgataataaggaaggaaaagtaaacaagcgtgtttgg
ttatccttacgattgagccggatatataaaggcctttctctggatgctatccaggatgga
atggtactcaccgcccaagtgaaaagtattgaggatcatggttacattcttcattttgga
gtatcctcctttagtggtttcatgccaaaggctgacagagaaagcgcgaagattgagagt
ggacaacttatacagtgtgttgtgaaggcaattgataaagctcgggaaattgttcacttg
agttctgacgaagatttgctttctaaatctattattaaagatctgaaaggcctttctatt
gatcatttaattcctggcatgatggtcaatgcacgtgttcattcagtcctcgaaaatgga
gttatgttatcatttcttacttatttcacaggaacagccgatatttttaatttgtccaac
tccttcccctctggtagctggaaagacgattacattaagaataagaaggtaaatgctcgg
atattatttgttgatccgtcaacaagggcagttggacttacattaaatcaacagttactt
cgccttaaagtaccctctattaacgttaaagctggagaaatctacgacaaagcacgtgtt
ttgaggatggataaaagggctggtctttttcttgaaataccttctccaactccatcacct
gggtttgttagtatacatgatgtctcagacaaagatgtgaaaaatgtggagaagaagttt
aaagaaggtagcatggcacgtgtccgtgtgcttggagtgcgacatcttgaaggagttgca
ataggcacgctaaaagaaagtgcttttgaagggtctgttttcactcatgctgatgttaag
ccaggaatggtagtaagggctaaggttgttactgttgagccttttggtgcaattgtgcag
ttttcgagtggcgtgaaagcactttgcccacttccacacatgtctgagttagaacatgtt
gtaaaaccgccgaagaagtttaaggttggagttgaattaactttccgtgttttgggttgc
aaatccaagagaataacagtgacattcaagaaatctctggtcaaatcaaaacttgatgta
ttggcctcatatgctgatgctaagattggtttattgacgcatggatggattactaaaatt
gaaaagcatggctgctttgtgaaattctacaatggagttcagggttttgttagcagatct
gagcttggattagagccaggtactgaagctgaaaatgtttaccacgttggtcaagtggtc
aaatgcagagttgtgagtgtagtccctgcttcaaggaaaataaatgttacttttctgata
tctacaaatagggttattcaagctgacaccccaaaggtgggaagtattgtatctggtgtt
gtggagcgacttactcctgcagcagttgttgtcagtgtaaatggcttctgcaagggatca
atacttaatgaacatctagcagaccatcgtggtcaagctgctcaactgaagaatttgttg
aagcctggccatgagttcagcgagctcttagttctcgatgttgaagggcaaaatttagtt
ctttcagccaagcaatcactcatcaactgtgcaagtgacattccatcagaaatatctcag
atgcatgcaggatctgtatttcatggttatgtttgcaacatcatagaagctggttgtttt
gttcgctttcttggacatctaactggtttttctcccaaggataaagctgttgatcgttca
gtagaaaagctgtccaatgccttctatgttggccaatccgttcggagtcatatcctaaat
gtaaatgcagaatctgccagagtgaagctttctcttcagcagtctatgtgctcttcagca
gactgttcatttgttcaaggatactttcttctagatcagaagatcacagaactgaagtat
tcagatccaagtagttctttccatgactggttgaacacttttgccattggtaacttggtg
gaaggggaggtgggagcgatcgaagaatatggcgttatcctgaacttccaaagccatccg
gatgttgtcggtttaattgaacatcatcaacttggtgacagtagtgtagaagtgggctct
tctgtgaagggtcttgttattgatttatctgatggagttgttaatatatcccttaaatca
gaacttgttcgcagtgtcagcaaagttggaaaaaagaagaaacgtcacagagctgcagtt
atggacttggagctacatgaggaagtgaatgcaatagtggagatagtcaaagagagtcat
gtggttctttccatccctgagtataattatgcaataggttttgcaccactgatggattac
aactcacaactacttccttgctgcaactatgaaaatggacagcgcattactgttgttgtt
ggaagtatgccaagttctggtccgacaggaagacttctcctactaccaaaagcatcaggc
aagaattctagtgttagcagttccaaaagagcaaagaagaaaagtgacttcaaagttgga
tcacttgttgaagcagagattattgatatcaagccacttgaacttcttctaaaatttggt
tccaatcttcatgggagaattcatattaccgaggtatttgatgatgattccaatgattgc
ccttttagtgaactccaaattgggcgaagtgtccaagcgagaatcgttgctgaggctgaa
cattcaggaaaaggtggcaaaaattccaaatgggaactatcaattagaccatctttgctt
caaggagggttagaagactttactcctcctaaagcagaattaaggcattcaattggtggc
attgtgcatgcttatgttgtcaaggtggatagagaatggatctggttaactgtatcaaga
gatgttatggcccatttatttattcttgatagttcagctgagcctggtgaactagaaaag
ttccaacagcgctatagtgttggccaggcagtgaaaggacgcattattggtgtgaacagg
gagaaacggttgttgagactgaaagcacttgacagtcagagtttgccagagaatataggc
gaaacacaaaaaccactctctgctactgttgaacatacaaaacaaggagatatcattggt
ggacgtattcaaaagattctacctggtgttggtgggcttgtcatccagattggacctcat
cttcatggaagggttcattatactgaaattgttgattcatgggtgcaagaacccatatct
ggatttcatgaaggtcagtttgtgaagtgtaaggtcctggatgtaagccgttcatcagaa
gggtctgtcagagttgatctatcacttcgctcatcaatgtgcgcaaattctaaccagtca
agaagattgtttgatgattcgagaattcgtacctcccgatttgagaagatcaatgacctg
tgcccgggaacagaggttaagggctatgtgaagagcgtgaattcgaaaggatgtttcatt
atggtttctcggactattgaggctaggattattctgtcaaatttatctgatgaatatgtg
gaaaatcctcaaaacgatttcccagttggactgcttgtacatggaagggtcttgtcctca
gaaccacaatcagggaaagttgaggtatcacttaggaagaatactggtagcaaatctcaa
aaatcagatgatattagttacagcgatctgcatgttggggacataattgctggtcaagtt
aagagggtagaatcctttggactatttgtgacaattcagggcagtgaattggtggcattg
tgccatgtatcagaactttctgatgaaccagtccttgatattcattcttgccacaaagct
ggtgataaggttaaagccaaaattttgaagattgatgaggaacggcatcgagtatccatt
ggaatgaagaaatcttacatcggacctgattctacgggtgatacaagtgatgatgaggat
gacgaaatagttcctgaggaaatcagtcgtaatcctgtgatgggtagagatcggaaccat
gcgttagttcttccgaaaccagaatccagggcttcagtgctgccactccaggtctccttg
gatgaatctgaaggttcagaccaagagaatgataataaaggtcaagaaattgctaatgga
actgaagtagatgataaaaagagcaacaaaaggttgaaggagaaggcgagaaaacaaaga
gaattagaaatcagtgccttggaggaaagggctttacaaagagatataccccagactcca
gatgaattcgagaagttggttaggagctctccaaacagtagcttcgtctggataaactac
atggcatttttgttagacctagcagatgttgataaggcccgtgcagtggcggaaagggct
ttgagaacaataaacatcagagaagaggaggagaaacttaatgtttgggtagcatatttt
aatctggaaaatgaatatggcagtccaagggaggatgctgtcaagaagatattccaaaga
gccttgcagtattgtgatcccaaaaaggtgcacttggctcttcttgcaatgtatgagagg
acagaacaatacacactagcagatgaacttcttgatagaatgacgaagagattcaaaact
tcctgcaagatttggttgcgctgtattcaattgtccctcaagcaaagcaaggatgttgag
tgcatcaaattgatagtgaagcgtgcacttctaagtctacctcagagcaagcgtagaaag
ttcctatcgcagactgctatcctggagttcaagtgtggagtgcctgaggaagggagatcc
agatttgaactgatcttaagagagtaccctaaaagaacagatctttggagtgtttaccta
gaccaagaaattcgccttggtgatacggaaattatacgggcattatttgagagagtaaca
tgccttagtcttcctccaaaaaagatgaagtttttattcaagaagtacctggaatatgag
aagtcgcaaggtgatgaggaaagaatcgagcatgtaaagcagaaggcactggagtacgtt
cagagttcactggcctga

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