Oryza sativa japonica (Japanese rice): 4342791
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Entry
4342791 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 1 isoform X2
KO
K12191
charged multivesicular body protein 2A
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4342791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4342791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4342791
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4342791
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4342791
Exosomal proteins of other body fluids (saliva and urine)
4342791
Exosomal proteins of colorectal cancer cells
4342791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Expansin_C
HTH_6
DUF3502
PspA_IM30
YlqD
Motif
Other DBs
NCBI-GeneID:
4342791
NCBI-ProteinID:
XP_015647002
UniProt:
Q8H430
Q0D7L1
LinkDB
All DBs
Position
7:join(7701466..7701502,7702873..7703003,7704660..7704764,7705301..7705564,7706127..7706267)
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AA seq
225 aa
AA seq
DB search
MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMGAVK
VMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMGQMNRQLNLP
GLQRIMMEFERQNERMEMTSEVMGDAIDDALEGDEDQEEETEELVNQVLDEIGIDINQEL
VKAPSAAVAQPAAAGKVAQAESAGGNGDGGIDADLQARLDNLRRM
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttgttcgggaagcggaagacgcctgctgagctcttgagagagaacaagaga
atgctggatcgatcaataagggaaattgaacgagaaagacagggattgcaagcccaggag
aaaaaactcattactgagattaagaaaacagcaaaggaaggccagatgggtgctgtcaaa
gtaatggccaaagatcttattcgaacacggcatcagatcacaaagttttaccaacttaaa
tctcagcttcaaggagtttctctaagagttcagacgctgaaatctacacaagctatgggt
gatgccatgaaaggtgttacaaaggctatgggtcagatgaacaggcagttaaatctgcca
ggattacagaggattatgatggagtttgagcgacaaaatgagagaatggagatgacgagt
gaagtcatgggggatgctatagatgatgctttggagggagatgaggatcaagaggaagaa
actgaggagcttgtgaatcaagtccttgatgaaattggcattgatattaaccaagagctt
gtaaaggccccttcggctgccgtcgctcagcccgcagcagcaggaaaggttgcgcaggct
gaatctgctggtgggaatggtgacggtggaatcgacgcggatttgcaggcgaggctggac
aatctgaggagaatgtag
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