KEGG   Oryza sativa japonica (Japanese rice): 4342847
Entry
4342847           CDS       T01015                                 
Name
(RefSeq) protein CIA1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4342847
   03400 DNA repair and recombination proteins [BR:osa03400]
    4342847
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    4342847
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     4342847
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_ELP1_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 eIF2A B-prop_COPA_B_2nd PROPPIN RMC1_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 4342847
NCBI-ProteinID: XP_015644761
UniProt: Q0D7F7 Q6YVM7
LinkDB
Position
7:join(8558232..8558423,8558514..8558660,8558781..8558999,8559152..8559216,8559792..8559857,8560009..8560086,8560992..8561054,8562168..8562237,8562614..8562697,8562924..8563001)
AA seq 353 aa
MAMDGGAAAVLREAHRLTGHTDRVWSLAWNPSPGAGAGPVLASCGGDKAVRIWKRAADGA
WQCSDVLEDTHNRTVRSCAWSPDGKLLATASFDSTTAIWEYSGGDFECVATLEGHENEVK
SVSWSASGSLLATCSRDKSVWIWEMQPGNEYECVSVQQGHTQDVKMVQWHPILDVLVSVS
YDNSIRVWADDGDDEWHCVQTLTEANNCGHSSTVWALSFNQKGDRMVTCSDDHTLKIWDT
SADLSQPKTSDNQESWRHLSTLTGYHNRTIFSAHWSSEDIIASGAGDDAICLFAEDKSSM
VEGPSYRLILKKEKAHDMDINCVRWCPQDPRMLASASDDGTVKLWELRGNALD
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggccatggacggcggcgcggcggcggtgctgcgcgaggcccaccgcctgacggggcac
accgaccgcgtgtggtccctcgcgtggaacccttcccccggcgccggcgccggccccgtc
ctcgcctcctgcggcggcgacaaggccgtccggatctggaagcgcgccgccgacggcgca
tggcagtgctcggatgtgctggaggacacgcacaaccgcacggtgaggtcgtgcgcatgg
tcccccgacgggaagctgctggccaccgcgagcttcgactccaccaccgcgatatgggag
tactccggcggcgacttcgagtgcgtcgccaccttggagggccatgagaatgaggtgaag
agcgtgtcgtggagcgcgtccgggtcgctgctcgcgacgtgcagccgggacaagtcggtg
tggatatgggagatgcagccaggaaacgaatacgagtgtgtctcggtgcagcaaggccac
acacaagacgtgaagatggtgcagtggcaccctatccttgatgtcctggtttctgtcagc
tacgacaattcaatcagagtctgggctgatgacggtgatgatgagtggcactgtgtacag
acattaactgaagctaataactgtggtcactcgtcaacagtatgggcattatcttttaac
cagaaaggtgataggatggtcacatgcagtgatgaccatacattgaaaatatgggacaca
agtgctgatttgtctcaaccaaaaactagtgacaaccaggaatcatggcgacatctttct
actctcacgggatatcataaccggaccattttttcagcccattggtcaagcgaggatatt
atagccagtggcgcaggtgatgatgcaatctgcttatttgctgaggacaagagtagtatg
gttgagggaccttcatacagattaattttaaagaaagagaaggcacatgacatggatata
aactgtgtccgctggtgtcctcaggacccgaggatgttggcatcagcaagtgatgatggc
acagtgaaattgtgggagctgagggggaatgcactggattga

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