KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4343000
Entry
4343000           CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4343000
   04120 Ubiquitin mediated proteolysis
    4343000
  09126 Chromosome
   03083 Polycomb repressive complex
    4343000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4343000
   04121 Ubiquitin system [BR:osa04121]
    4343000
   03036 Chromosome and associated proteins [BR:osa03036]
    4343000
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    4343000
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     4343000
   Cul7 complex
     4343000
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     4343000
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     4343000
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 4343000
NCBI-ProteinID: XP_015646287
UniProt: A3BIW1 Q7XAL5
LinkDB
Position
7:12776940..12777970
AA seq 190 aa
MEADKSGEGEKAGGKTISFRCSDGQAFHMPVAAAMLSTAIRKMFDKYPSIDHGGVIELPH
QISSGIFPKVKEYCTKHAKVDDKGNPTVSTNTGAAAAASSSSTDDEEEDLKNWDKEFVNM
EVKPLHDLLLVAHLLDIKGLFHITCRKVADMLKGKTSEEMRQILNIRNDFTEEEDKAIKE
QNPWVFPDPE
NT seq 573 nt   +upstreamnt  +downstreamnt
atggaggcggacaagagcggggagggggagaaggccggcggcaagacgatctccttcagg
tgctcggacggacaggccttccacatgccggtggccgcggcgatgctaagcacggccatc
cgcaaaatgttcgacaagtaccccagcatcgaccacggcggcgtgatcgagctcccccac
caaatctcctccggtatcttccccaaggtcaaggaatactgcaccaagcacgccaaggtc
gacgacaagggcaaccccaccgtctccaccaacaccggcgcggcggcggcggcgtcaagc
agcagcaccgacgacgaggaggaggacctcaagaactgggacaaggagtttgtcaacatg
gaggtgaagcccctccacgacctcctcctcgtcgcccacctactcgacatcaaaggcctc
ttccacatcacctgccgcaaggtcgccgacatgctcaagggcaagacctccgaggagatg
cgccagatcctcaacatccgcaacgacttcaccgaggaagaagacaaggcaatcaaggag
cagaacccctgggtcttcccggatccggagtag

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