KEGG   Oryza sativa japonica (Japanese rice): 4343142
Entry
4343142           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K24935  tetratricopeptide repeat protein 27
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:osa04990]
    4343142
Domain-containing proteins not elsewhere classified [BR:osa04990]
 Other domain-containing proteins
  Tetratricopeptide repeat-containing proteins
   4343142
SSDB
Motif
Pfam: TPR_14 TPR_CcmH_CycH TPR_17 TPR_1 TPR_2 TPR_8 TPR_16 TPR_19 TPR_11 DUF7017 TPR_9 TPR_12 TPR_10 HAT_PRP39_C ZW10_C2 HAT_PRP39_N ANAPC8
Other DBs
NCBI-GeneID: 4343142
NCBI-ProteinID: XP_015644681
UniProt: A0A0P0X610
LinkDB
Position
7:complement(join(15934624..15934707,15934948..15935100,15936905..15937024,15937106..15937321,15938178..15938244,15938327..15938389,15938883..15938974,15939918..15939987,15940064..15940122,15940223..15940307,15940719..15940796,15940903..15941001,15941095..15941186,15943848..15943937,15944213..15944271,15946242..15946557,15947474..15947555,15948274..15948584,15949523..15949673,15951648..15952054))
AA seq 897 aa
MAASPAPPGPTFLREVELRLLRCTLPSPATLPPPPSPPPRHPLAPVAASAVAAVDAGDYA
AALASAAPHLLPPTAPAAPGSAARFYGDLAAAAEGFLRGDDGGAAAAGEGFECRCAVVLS
AAVAAILAFTQQNVTGPPGKYSPFPFWTSSLDEGCYSNLEDEWDAWASAQLASIGSHVHG
KFSLMQFIVFAELMLTSIKSLDPTDCCSVSWWLCRLSMVRQNIVDELSSTLFDQVQEYKN
KTLAHFGELENVFSYWGPLLCDGEGSYFVSAAFLEAGIAEYKYGRIDQSRLHLDSAQEAC
GLHLSLTGMLGFRTIHQVDAKSQMVLVANTSGPASGEGQVTELTGTQDDAAALKNARSSV
PGESDEFCDILRMPRLVENDNDSGNDEKKDPSKKAVLTAMQQAAVLAECLHVSRRSRHDE
MSGWEMAPFIESIDSQEDSYFVVRSLCDILRIRWESTRNRTKQRALLMMENMVEDVGNDF
PVAAQRAKLVFGVQMPTIPALRKEYGELLISCGIVGEALDIFKDLELWDNLIYCYRLLGK
VADATSLINARISVTPNDPRLWCSLGDVTNNDDHYKKALEVSNNKSARALRSLARSAYNR
NDFHASKMLWESALALNSLFPDGWFAYGTVAWKDKDLEKAVDAFTRSVQIDPENGEAWNN
IACLHMIRGRSQAAVQAFKEAVKFKRNSWEVWDNYSKVLLDTGSIQQTLEAVKMVLNLSS
NKRFNIDLLEKVMAMLEEQPTHLSDTQEAESSRSTSDDANQETRKYNQLLDIIGDILQQI
VRSGGSNSEIWGLYARWHKTKGNLIACSEAMLKQVRSLQGSGLWHDQTKFTKYAQASLQL
CKIYMEISSSTGSQRELFSAEMHLKSSLKQASDFLHTPEYKALDDCLAEIKNLIGPA
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggcggcatccccggcccctcccggccccaccttcctccgcgaggtcgagctccgcctc
ctccgctgcacgctcccctccccggccaccctgcctcccccgccctcgcctccccctcgc
cacccgctcgccccggtcgccgcctccgccgtcgccgccgtcgacgccggcgactacgcg
gccgccctcgcctccgccgccccgcacctcctccctcccaccgcccccgccgcgccgggg
tccgcggcgcggttctacggcgacctcgccgccgccgccgaggggttcctgcgcggggac
gacggcggggcggcggcggctggcgaggggttcgagtgcaggtgcgccgtcgttctgtcg
gcggcggtggccgcgattctcgcgttcacgcagcagaacgtgacggggcctccagggaag
tattcccctttccctttctggacttcatcattggatgaaggatgttatagtaatcttgaa
gatgaatgggatgcatgggcttctgctcagttagcttctattggttcccatgttcatggg
aaattctcacttatgcagttcattgtctttgcagaacttatgttaacttctataaagagt
ctggaccccacagattgttgtagtgtgtcatggtggttgtgtagattatctatggtccga
cagaacattgtagacgagttatcatccactttgtttgatcaagtacaagagtacaagaat
aagacattggcccactttggtgaacttgaaaatgtttttagctactggggtcctttgttg
tgtgatggagaaggctcatattttgtctcagctgctttcttagaagctggaattgcggaa
tataaatatggcagaattgatcaatcaaggctgcatctggatagtgctcaagaagcatgt
gggctgcatctctctctcacagggatgcttggttttcgaacaatacatcaggtggatgca
aagtcccaaatggtacttgttgcaaacacaagtggaccagcatctggtgagggacaagta
acagaactcacaggaactcaggatgatgctgctgctttaaaaaatgcaaggagttccgtt
cctggtgaaagtgatgaattttgtgatatactaagaatgccaaggctggttgaaaatgat
aatgattcgggtaatgacgagaagaaagatccaagcaaaaaggcagtactgacggctatg
caacaagctgctgtcctagcagaatgtttgcatgtgagccgaaggagtcggcatgatgaa
atgtctgggtgggagatggcaccgttcatagagtcaattgattctcaggaggattcctac
tttgtggtcaggagcttgtgtgatattctgcgtattagatgggagtccacccgcaatcgg
actaagcagagggcgctattgatgatggaaaatatggttgaagatgttggcaatgatttc
cctgtggctgcacagagagccaaactggtttttggagttcagatgccaactatccctgca
ttaagaaaagaatatggtgagcttttgataagctgtggtatagttggagaagcactggat
atttttaaagaccttgaattgtgggataatttaatctactgctatcgattattaggtaaa
gttgctgatgccactagtctaataaatgctcgaatctctgttacacccaatgacccgaga
ttatggtgttcacttggcgatgttactaacaatgatgatcattacaaaaaagcattggaa
gtctcaaataacaaatctgctcgagctctgcgttcactggctcgcagtgcttacaacagg
aatgatttccatgcatccaaaatgctctgggaatctgcattggcgttgaattctttgttt
ccagatggctggtttgcatacggtacagtggcatggaaggataaagatcttgagaaagct
gtggacgcttttactcgttctgtgcagatagatcctgaaaatggagaagcatggaacaac
atagcctgcctgcacatgattagaggaaggagccaagcagcagtccaagcattcaaagaa
gctgtaaagttcaagaggaatagttgggaggtttgggataattacagtaaggttcttttg
gacacaggaagtattcaacagacactagaggctgtcaaaatggtactaaacctatcctcg
aacaaacgtttcaacattgatttgttggaaaaggtgatggccatgcttgaagaacaacct
acacatctctctgatactcaagaagctgaatcttccagaagcacctcagatgatgcaaat
caagagaccaggaagtacaaccagttgttagatataattggtgatatccttcagcagatt
gtacgaagtgggggtagcaattcggagatatggggtttatatgcgaggtggcataagacg
aagggtaaccttatcgcatgctctgaagctatgttgaagcaagttcggtctctccagggt
tctggactatggcatgaccagacgaagttcactaagtatgctcaagcttccctgcagctt
tgcaagatctatatggaaatttcttcttcgactggaagccaaagagagttattttcagct
gagatgcaccttaaaagctccttaaaacaggcttcagacttcttacatacccctgagtat
aaagctctcgatgactgccttgcagaaataaaaaaccttattggccctgcctag

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