KEGG   Oryza sativa japonica (Japanese rice): 4343172
Entry
4343172           CDS       T01015                                 
Name
(RefSeq) ABC transporter B family member 28
  KO
K05657  ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:osa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    4343172
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:osa02000]
    4343172
Transporters [BR:osa02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB2, 3, 8, 9, 10 subgroups
    4343172
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N ABC_ATPase AAA_16 AAA_22 AAA_21 AAA_30 AAA_29 RsgA_GTPase Zeta_toxin AAA_5 Rad17 AAA_28 SRP54 AAA_33 AAA_14 AAA_25 AAA_23 nSTAND3
Other DBs
NCBI-GeneID: 4343172
NCBI-ProteinID: XP_015644946
UniProt: Q69RG8 B9FX41
LinkDB
Position
7:join(16539918..16540272,16540399..16540586,16541260..16541283,16541876..16541977,16542233..16542323,16543094..16543194,16543328..16543378,16545005..16545133,16546151..16546213,16546307..16546550,16548007..16548155,16548234..16548323,16548722..16548856,16548958..16549014,16549458..16549514,16551350..16551586)
AA seq 690 aa
MAISTWSTRLLLSPSASASSHRPNPTRRLAFPSPISGPGRQAPRAYISAPASGPDAYPSP
ALDAAAAAADVAAAIASSDAVTWAGVWALLSPHRARIAVSLAALLACTTCTLSMPLFSGR
FFETLIGRGSEPLWRLLSKIAVLYTLEPIFTIVFVINMTVIWEKVMARLRSQIFRRILIQ
KMVFFDRHKVGELTGLLTSDLGTLKSVVSDNISRDRGLRALSEITGTLCILFTLSTELAP
VLGLLMVSVSVLVALFKRSTVPTFKSYGIVQARISDTASETFSAIRTVRSFGGEKRQISM
FDNLALAFQNSGTKLGVLKSANESLTRVVVYVSLMALYVLGGSKVNAGKLSVGTMASFIG
YTFTLTFAVQGAVNTLGDLRGTFASVERINSILSAEDIDDSLAYGLAKELEDSNGAVHEN
GTANKHYMSALKSSSSCSNLAWSGDIHLEGVHFSYPLRSDVEILNGLDLTIECGKITALV
GPSGAGKSTVVQLLARYYEPTHGRITVAGEDIRVFDKREWSRVVSLVNQDPVLFSVSVGE
NIAYGLPDDVVSKDEIIKAAKAANAHEFIVSLPQGYDTLVGERGSLLSGGQRQRIAIARA
LLKNSPILILDEATSALDTTSERLVQEALNHLMKGRTSLVIAHRLSTVQNAHQIAVCSDG
KIAELGTHAELVASGGRYASLVGTQRLAFE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcgatctccacctggagcacgcgcctcctcctctccccctccgcctccgcctcgagc
catagacctaaccctacccgccgcctcgccttcccctcccccatctccggccccggccgc
caggctccccgcgcctacatctccgcgccggcgtccggccccgacgcctacccgtccccg
gccctcgacgccgcggcggcggcggcggacgtcgccgcggccatcgcctcctcggacgcc
gtcacgtgggcgggggtctgggccctcctgtcgccgcacagggcccgcatcgcggtctcc
ctcgcggcgctcctcgcgtgcaccacctgcaccctctccatgccgctcttctcagggagg
ttcttcgagacgctgataggaaggggctccgaacccctgtggaggctgctgtccaaaatc
gccgtgctgtatacgctggagcccatatttacaatcgtattcgtgatcaacatgaccgtg
atctgggagaaggtgatggcgaggctccggagccaaatatttcgcaggattctaatccag
aagatggtattctttgatcgtcacaaggttggcgagttgactggtttgttgacatctgat
ttgggtactttgaagagtgtcgtaagtgacaacatatcaagggatcgtgggctaagggca
ctctctgagatcaccggtacactttgtatacttttcacattatccactgagctagctcct
gtactaggactcctaatggtctctgtctccgtgctagttgctcttttcaagaggtcaact
gttcccacatttaaatcttatggaattgtccaagcacgtatatcagacactgcatcagaa
acattttcagctattcgtactgttaggtcatttgggggtgaaaaacgacaaatttctatg
tttgacaatttggcacttgctttccagaatagtggcacaaaactaggcgtgctgaaatct
gccaacgagtcattgactcgggtggtagtctatgtttccctaatggcactttatgttctt
ggtggaagcaaggttaatgcgggaaaattgtctgttggaaccatggcatcttttattggt
tacacattcacactgacattcgctgttcaaggagctgttaatactcttggtgatctacgt
gggacatttgcttctgtagaaagaataaattctattctatcagcagaggacattgatgat
tcacttgcatatggtttagccaaagaactagaagattcaaatggtgcagtgcacgaaaat
ggcactgctaacaaacattacatgtcagcactaaaatcatcaagcagctgtagtaatctt
gcctggtctggtgacattcacctagaaggtgtccacttttcttacccactgagatctgat
gtggagatcttaaatgggcttgatcttacaattgagtgtggaaaaattacagcacttgtt
ggacctagtggtgctggaaaaagcacagtggtgcaacttcttgcacggtactatgagcca
actcatggtcgcatcactgtggctggggaagacatccgtgtatttgataaaagagaatgg
tctcgagttgtatccttagtgaatcaggaccctgtcctattctcagtttctgtcggagaa
aacatcgcttatggtcttccggatgatgttgtttccaaggatgagataataaaggccgct
aaagctgccaatgctcatgaattcattgtctctcttccacagggctatgacacacttgtt
ggtgaacgtggcagcctcctaagtgggggacagagacagagaattgctattgctcgtgct
cttctgaaaaactctcctattctaatacttgatgaggctaccagtgcacttgatacgacc
agtgaacggcttgtacaggaagctctcaatcacttgatgaagggaaggacttctctggtg
atcgcgcacagattgagcaccgtgcaaaatgcgcatcaaatcgctgtctgctcagatggc
aagatagcagaacttgggactcatgctgaactggttgctagcggtggccgatatgcgtca
cttgttggtacacagaggctcgcatttgagtaa

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