Oryza sativa japonica (Japanese rice): 4343227
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Entry
4343227 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 24 homolog 1 isoform X1
KO
K12193
charged multivesicular body protein 3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4343227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4343227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4343227
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4343227
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4343227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF3375
PSD4
NAD_binding_11
Motif
Other DBs
NCBI-GeneID:
4343227
NCBI-ProteinID:
XP_015647462
UniProt:
Q8GVS9
LinkDB
All DBs
Position
7:complement(join(17587106..17587189,17587475..17587666,17587848..17587969,17588582..17588684,17590387..17590463,17590834..17590945))
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AA seq
229 aa
AA seq
DB search
MEKVKGLLKPRPTPQQQLREWQRKLRNECRVLDRQIRDVQREEKNVEKSIREAAKRNDIG
SAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSAEVMKIVNNLM
KAPELAATMQEFSKEMTKAGVMEEMVNDAVDSALDSEDMEEEIEEEVDKVLASVAGETAS
QLPDAVRKQRINQASTSRVPEERQAVAEGADDDEEDLEEIRARLAKVRS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtgaagggtctgctgaagccgcggccgacgccgcagcagcagctgcgggag
tggcagcgcaagctccgcaacgagtgccgcgtcctcgaccgccagatccgagatgtgcag
agggaggagaagaacgtggagaagtctatcagggaggctgcaaagcgcaatgacattgga
tccgcaaaggctcttgctaaggaactagtgaggtcaagacgtgctgttaatcgtctctat
gaaaacaaggctcaactaaattcagtatcaatgcatcttggagaaattgttgcaacggca
agaactgtcggtcatctgtcaaaaagtgctgaagttatgaaaatcgttaacaatctaatg
aaagctccagaattggctgccaccatgcaagaatttagtaaagaaatgacaaaggctggt
gtgatggaagagatggtcaacgatgcagttgattcagctttggactctgaggacatggag
gaggaaattgaagaggaggttgacaaggttcttgcttcagtagctggggagactgcctca
cagctacccgatgctgtgaggaaacagaggataaaccaagcttcaacaagcagggtccca
gaagagcgacaagctgttgctgagggcgctgatgatgatgaggaagatctggaagagatc
agagcacggcttgctaaagtgaggtcataa
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