Oryza sativa japonica (Japanese rice): 4343261
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Entry
4343261 CDS
T01015
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4343261
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4343261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4343261
04121 Ubiquitin system [BR:
osa04121
]
4343261
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4343261
Archaea
4343261
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
4343261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
CFAP298
DUF2604
Ubiquitin_5
Plexin_RBD
UBL_UBAC1
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
4343261
NCBI-ProteinID:
XP_015646154
UniProt:
A3BJV9
LinkDB
All DBs
Position
7:complement(join(18358674..18358715,18359697..18359763,18359887..18360094,18360292..18360394))
Genome browser
AA seq
139 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGGRPGYPMIEPNLLALARSKMEKKMICRKCYARLPYKATNCRKKK
CGHTNELRPKKKLVSKLSV
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacggggaagaccatcaccctcgaggtcgagagcagc
gacaccatcgacaatgtcaaggccaagatccaggacaaggaagggatcccgccggaccag
cagcggctgatcttcgccgggaagcagctggaggacggccggacgctggccgactacaac
atccagaaggagtcgacgctgcacctcgtgcttcgcctccgcggcggcggccgcccgggc
tacccgatgatcgagcccaacctcctcgccctcgcccgcagcaagatggagaagaagatg
atctgccgcaagtgctacgcgcgccttccctacaaggctaccaactgtcgcaagaagaaa
tgcggccacaccaacgagctgaggccaaagaagaagctggtatccaagctttctgtttga
DBGET
integrated database retrieval system
