KEGG   Oryza sativa japonica (Japanese rice): 4343276
Entry
4343276           CDS       T01015                                 
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
osa  Oryza sativa japonica (Japanese rice)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 AAA_30 AAA_11
Other DBs
NCBI-GeneID: 4343276
NCBI-ProteinID: XP_015647242
LinkDB
Position
7:complement(join(18564027..18564116,18564332..18564394,18564518..18564577,18564700..18564762,18564974..18565024,18565103..18565237,18565308..18565401,18565591..18565751,18565984..18566040,18566116..18566202,18566275..18566346,18566829..18566867,18566958..18567161,18568102..18568179,18568704..18568754,18569320..18569386,18569530..18569630,18569715..18569831,18570919..18571002,18571076..18571204,18571280..18571405,18571517..18571591,18571709..18571842,18571927..18572032,18572115..18572171,18573282..18573468,18574139..18574302,18574399..18574440,18575024..18575248,18575433..18575639,18575938..18576111,18576499..18576888))
AA seq 1229 aa
MSRWKENASPLPLHPGGSSSLLPRKRPPPSPPPPQPPCPPPRRPLADVTGNALRQRGSGG
GGCGYGYSTPAPKAPRPSCRFLLDDDEGMDEAFLREVDAICEEHERSSARKDKEAGEAPP
SIPSEPESGVSGDAFRKEENAIGEEGDAQPLATSQEEMEDADEEEICELWFGDDSLPPAI
SIATGGGELLGVKWLKELRMFCLLGRQFEDAFWNISDITEEVHHTGSSAKCQEDMDGKNS
DGPSVPSVICHEEREGELVDAFLEDLDAIHQGDATKGQEEPQETELEIEENEGCVPKKYY
EYLQSLNDRQREAACSDVTIPLMIVAGPGSGKTSTMVGRVLTLLKEEFPPSNILAMTFTT
AAASEMRDRIGTVVGKAVAKEIVISTFHSFCLQLCRTHAEKLGRTSEFIIYGNGQQRRAV
IEAERLLESDKNNGLGDANKNCDGDIKNSFKDKAKKWQKFVTQAKASGRTPEEYEKKGDL
TGASILRHYNEILRSCNALDYHDFINSSITLLTKFPEVYDECRNTWQAIVVDEFQDTSAM
QYYLLKTLASHNRITIVGDEDQSIFSFNGADVSGFDSFRRDFPNHKEVRLSKNYRSTRAI
VEAATALIHNNTKRQSHKLAETDNPSGNKIIVKECHSEDSQCAFVIDKIIETTSSSVEGC
HFGKIAVLYRRQITGKAFQASFRNRKIPFNIHGVAFYRKKVIKAIMAILKTTLPGCDDDA
PWHQAFKAILPGDKEEKKKIIHHIEKISLARKCSFISAATDIFSAKVSGTFKRAQITQGR
KVLSALDSLSKLVEREQSVSVVISSAGDMLPQKYLLEKRAIVDADGGKLLNEDNDIRSVL
QFLMDDVSDFLSTHFSSSVDTSKTEEKGCASTLKAFIDYISLRETENFRSRKEENKNSIT
LTTIHQSKGLEWDVVFIVQANDSEIPLLHEYNGTVKEAGSTLEEERRLFYVAMTRARKKL
YILHVTVDSNRQLLQPSRFLREIPAHLLEVQGEGTVRRTPEQPVNIPFDQPEGDTSVERP
MVVRNETSPFPEMDQPCLANDFLKRFEIEDRAIISHIFHQWAKKQAFQNPKRLLDKFFFF
VQGKYGQQLTGGLNEVGSISKLHLCHVCCCIIFARSQDLRHIGFVIDERLRGKGYKRKDV
LCKLKSFLSGDEAFGYAQYVIKWEQIPIDKRSHLMRERQEHFQKQRIENSMGSSEPTPKQ
ISYLRNLGCTITPTSRLHASHLIEKYKSL
NT seq 3690 nt   +upstreamnt  +downstreamnt
atgtcgcgctggaaggagaacgcctcccctctccccctccaccccggcggctcctcctcc
ctcctcccccgcaagcgccctcccccatccccgccccctccgcagcccccgtgcccgccg
ccgcgccgcccgctcgccgacgtcaccggcaacgccctgcggcagcggggatccggaggg
ggaggatgcgggtacgggtacagcacccccgccccgaaggcgcccaggccctcctgcagg
ttccttctcgacgacgacgaaggcatggacgaggcgttcctgcgggaggtggacgccatt
tgcgaggagcacgagcggtcctcggccaggaaggataaggaggccggcgaagcgccgcca
tcgatcccctccgaaccggagagcggagtgtctggagatgcattccggaaggaggagaat
gccattggtgaggagggtgatgctcagcctttagccacgagccaggaagaaatggaggat
gcggatgaagaagaaatctgtgaactgtggtttggtgatgattcacttccaccggccatt
tcaattgccacagggggtggagagttgttaggtgtcaagtggctaaaggaacttaggatg
ttttgtttgcttgggcggcagtttgaggatgcattctggaacatcagtgacattactgag
gaggtgcaccatacaggctcttctgccaagtgccaggaggatatggacggaaaaaatagc
gatggtccttcagttccctcagtaatttgccatgaagagcgggaaggagagcttgtcgat
gcattcttggaggatcttgatgctatccatcagggtgatgctaccaagggccaggaggag
ccacaggaaacggaactagaaattgaggaaaatgaagggtgtgttccaaagaagtactac
gaatatttgcagtccctgaatgacaggcagagggaagctgcatgtagtgatgtgactatt
ccactaatgatagttgctggtccaggaagtggaaagacatcaacaatggttggtcgggtg
ctcacactgctcaaagaggaatttccaccatcaaacattcttgctatgacattcacaact
gctgctgcttctgaaatgcgggatcgaattgggacagtggtggggaaggcagttgccaag
gagattgtaataagcacatttcactcattctgcttgcagctttgcaggacccatgctgaa
aagctaggccgcacatctgaattcataatctatggaaatgggcagcagaggagggctgtt
attgaggcagagcgtctattggaaagtgacaaaaataatggtctaggagatgcaaataag
aattgcgatggagatattaaaaattctttcaaggacaaagctaagaaatggcagaagttt
gttacacaggcaaaagcttctggtaggactcccgaggagtatgaaaagaagggggatttg
acaggagcttcaattcttcggcactacaatgaaatattaaggtcttgtaatgctcttgat
taccatgattttattaattcatcgataacccttctcacaaagtttcctgaagtatacgac
gagtgccgaaatacatggcaggcaatagtagttgatgagtttcaggatacaagtgctatg
caatattatcttttaaagacactagcatcccacaaccgcataactattgttggtgacgaa
gatcagtccatcttcagtttcaatggtgctgatgtctctggctttgattcatttcgtaga
gattttccaaatcacaaagaggtcagattgagcaagaactatcgctctacacgggcaatt
gttgaagcagcaacagctttaattcacaacaacactaaacggcaaagccacaaacttgct
gagaccgacaatccctctgggaataagatcattgttaaggagtgccacagtgaagattca
caatgtgcatttgttattgacaagattattgaaaccacatctagttcagttgaaggatgt
cattttggcaaaattgctgtcctatatcgcagacagatcactggcaaagcattccaggcg
tcattccgcaacagaaaaattccttttaatattcatggtgtggctttctacaggaaaaag
gttatcaaagcaattatggccatacttaaaactacattaccaggctgtgatgatgatgcc
ccatggcatcaagccttcaaggccattcttcctggtgacaaggaagaaaaaaagaagatt
atacatcatattgaaaagatttcattggctagaaagtgtagcttcatatcggctgctact
gacatcttcagtgcaaaggtctctggtaccttcaaaagggcccagattactcaaggaaga
aaggttttatcagccttggatagcctatcaaaacttgttgaaagggaacaatcagtttca
gtggtcatttcttctgctggagatatgctacctcagaaatacctacttgaaaagcgtgcg
attgttgatgctgatgggggtaaattattaaatgaagataatgacatcagatcagtcctt
cagtttttaatggatgatgtgtctgacttcttatcaacacatttttctagttcagtggat
acaagcaagactgaggagaaaggctgtgcttctacacttaaagcctttattgattatatc
tctttgagagaaactgaaaacttcagatcacgaaaggaggaaaataaaaactctatcaca
ttaacaactatccaccagtcaaaaggtttagagtgggatgttgtgtttatcgtgcaggca
aatgattcagaaattcctttgttgcatgagtacaatggcactgtgaaagaagctggaagc
acactggaggaggagagaaggctattctatgttgcaatgacacgagctcgaaagaaactg
tacatcttacatgtcacggttgactctaatcgccagctgctgcaaccttcacgcttcctc
agggagattcctgctcaccttcttgaggtacagggtgagggaactgtgagaagaactcct
gaacagccggtgaacattccatttgatcaacctgaaggagatacatcagttgaaaggcct
atggtggtacggaatgaaacttcacctttcccagaaatggatcagccatgtcttgctaat
gatttcttgaagaggtttgaaattgaggatagagcaataatttcacatatatttcatcaa
tgggcgaagaaacaggcatttcaaaatccaaaaaggctgcttgataagtttttttttttt
gtacaaggaaaatatggtcagcagctcactggcggactgaatgaagtcggtagtatcagc
aaattacatttatgccatgtctgttgctgtattatttttgctaggagtcaggatctgaga
catattggttttgttattgatgaacgtttacgaggtaaaggatacaagcgcaaggatgta
ttgtgcaagctgaaatcattcttaagtggtgatgaagcgtttggttatgcacaatatgtt
atcaagtgggaacagattcctatcgacaagcggagccatttgatgagagagagacaggaa
catttccaaaagcagaggatagagaactccatgggttcctcagaacctacacctaagcag
atatcgtacctccggaacctggggtgcaccatcacacccacgtctcgcctgcacgcgtcg
catcttatcgagaagtacaaatctctatga

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