Oryza sativa japonica (Japanese rice): 4343346
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Entry
4343346 CDS
T01015
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4343346
Enzymes [BR:
osa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
4343346
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
4343346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
PrmA
Ubie_methyltran
CMAS
Methyltransf_31
MTS
UPF0020
Methyltransf_4
Methyltransf_23
PCMT
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
4343346
NCBI-ProteinID:
XP_015644880
UniProt:
A3BK69
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All DBs
Position
7:join(19629909..19630256,19630338..19631066)
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AA seq
358 aa
AA seq
DB search
MKRAVSSIRSRDVAHLAAAATAPSPAAAEAWDGRFRLHKPRGQHLLTNPRVLDAIVRRAA
LRPGDAVLEVGPGTGNLTVRLLESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRA
DAVEAEFPEFDVCVANIPYGISSPLIAKLLFGPYRFRAATLLLQKEFARRLVAAPGDSEY
NRLAANVRMVADARLLMDVSKRDFVPMPKVDSSLVEIRPRAAEPNVDLAEWLAFTRSCFG
QKNKTLGAIFKQKRKVLELFRRSRCAEERCDGNANAGGGSRLIALGGGDDDGDMSDGDSN
EGHDGAPSFSEEEVAVFKAKITGALESCELAGKRPSKLSNDELLRLLKLLNEQGVRFQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggccgtctccagcatccgcagccgcgacgtggcccacctcgccgccgccgcc
accgccccctcgccagcggcggcggaggcgtgggacgggcggttccggctgcacaagccg
cgggggcagcacctgctcaccaacccgcgcgtcctcgacgccatcgtccgccgcgccgcg
ctgcgcccgggcgacgccgtcctcgaggtcggcccgggcaccggcaacctcaccgtccgc
ctcctcgagtcccccgccgcccgcgtgtccgccgtcgagatcgatccgcgcatggtcgac
gccgtcaccgcccgcgtcgacgccctcggcctcgcgcacaagctcacggtgatcagggcg
gatgccgtggaggccgagttcccggagttcgacgtgtgcgtggccaacatcccctacggg
atctcctcgccgctcatcgcgaagctgctgttcggcccctaccggttccgcgcggcgacg
ctgctgctgcagaaggagttcgcgcggcggctcgtggccgcgccgggggactcggagtac
aaccgcctggcggcgaacgtgcggatggtcgccgacgcgaggctgctcatggacgtgagc
aagagggacttcgtgcccatgcccaaggtggactcctccctcgtcgagatccggccgagg
gcggccgagcccaacgtcgacctcgccgagtggctggccttcacgcggtcgtgcttcggc
cagaagaacaagaccctcggcgcgatcttcaagcagaagaggaaggtcttggagctcttc
aggagatcccggtgcgcggaggaacgctgcgacggcaatgccaatgccggtggcggcagc
agactcatcgcacttggcggtggcgacgacgacggtgacatgagcgacggcgacagcaat
gaaggccacgacggagcacccagcttcagtgaggaagaggtcgccgtgttcaaggcgaag
atcaccggtgcgttggagtcctgtgagctcgccggcaagaggccctccaagctgtcgaac
gacgagctcctgcgtttgctcaagttgctcaatgaacaaggggtacggtttcagtag
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