Oryza sativa japonica (Japanese rice): 4343372
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Entry
4343372 CDS
T01015
Symbol
OsJ_24443
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
4343372 (OsJ_24443)
Enzymes [BR:
osa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
4343372 (OsJ_24443)
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
4343372 (OsJ_24443)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Beta-prop_TYW4
Kelch_1
Kelch_HCF
Kelch_2
Kelch_FKB95
TYW2_N_2
DUF6242_C
NANM
Beta-prop_Calicin
MTS
DNA_methylase
PBP_N
Motif
Other DBs
NCBI-GeneID:
4343372
NCBI-ProteinID:
NP_001409098
LinkDB
All DBs
Position
7:join(19989572..19990013,19990424..19990614,19991040..19991242,19991686..19992111,19992271..19993416,19993536..19993665,19993988..19994223,19994306..19994441,19994524..19994600,19995423..19995529,19995627..19995727)
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AA seq
1064 aa
AA seq
DB search
MEFDRRKAAALAALASPAPDKSPKGGVDAPIAPLLDALNSHPDLFTTSSCSGRVSVLAQP
PPPQQADPGGAKTKKKARGGGWVYISHDPADPEALVEVLFGVKEGGGGGDDELVFRFEPM
IVAVECRDAAAAAALVAAAVGAGFRESGITSLQKRVMVALRCSIRMEVPLGQTKELVVSP
DYIRYLVRIANSKMEANKKRMGGFLDLLQAKGLLGSSKGCATADNESLVAKKSSDTYNCD
ADNNCDNGFVEISLEASYLESQDPVLQNGAKHGFGNAKRLTQEEALPTLSGNTTHCLSTA
ALEITGEPIEKLFLWGQSACALTVGREHHILTFGGFGGPGRHARRNYSLLVNPGSGLLTE
LKVTGSPSPRMGHTITVVGNDIYVVGGRSGPSEILNDIWVLERSNNRWSKVDCSGDFFRP
RHRHAAAAVDRKVYVFGGLSDDGLCSCMNIMDTASIQWNVISPDDKWPCARHSHSLVSYG
SKLFLFGGHDGQRALNDFYSFDTTTLKWNKENTNGKAPSPRFSHCMFIYKDYLGILGGCP
IRESSQEIALLNLKHKIWFYVSIPSLSQCLCVRSSSVIIDDDLVIVGGGASCYAFGTRFS
QPIKIDLHLLESIFKLAYNKEKEMSVQHGSVSNVDLLEGHEENCNPSDNVKVVIDTATLG
SSPLVLQLEKKYAKLAKDILKKFGWLDLTRKVRVSQDNIHVLFPVSKTFHALITDKHLKV
QPDDSCVFEELLPFSENKLFGASISLQKALEILLLCRGSILKDEVAISRKASKTPQTIMR
ELVSVLLDKKGLPSQLLEQLPTRWETLGDIIVLPKTCFKDPLWESVRDDLWPLVAKSLGA
QRLARQGKITPNGTRDSTLELLVGNDGWLTHHENGICYSLDATKCMFSSGNRSEKLRMGK
LDCRDEVVVDLFAGIGYFVLPFLVKANAKLVYACEWNPHALEALQRNVMDNHVADRCIIL
EGDNRLTAPKGIADRVCLGLLPSSECSWDTAVRALRAEGGMLHIHGNVNDSDESLWLDNV
VKSITNIAKTHGLSWNVTVEHVERVKWYGPHIRHLVVDVKCRAT
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgatcgccggaaggcggcggcgctggccgcgctcgcgtcgccggcgccggac
aagtcgccgaagggcggcgtcgacgcgcccatcgcgccgctcctcgacgccctgaactcc
cacccggacctcttcaccacctcctcctgctccggccgcgtctccgtcctcgcgcagccg
ccgccgccgcagcaggccgaccccggcggggccaagaccaagaagaaggcgcggggcggc
gggtgggtgtacatctcccacgaccccgcggacccggaggccctggtggaggtgctgttc
ggtgtgaaggaagggggagggggaggcgatgatgagctcgtgttcaggttcgagccgatg
attgtggccgtggagtgcagggacgcggctgcggcggcggcgctcgtggctgccgcggtt
ggcgcggggttccgtgagtcaggcatcacaagcttgcagaaacgtgtaatggtagcattg
agatgctcaattcggatggaggtgccactaggtcagaccaaagagctcgttgtctctcct
gattatattaggtaccttgttagaattgccaacagtaaaatggaggctaacaagaagcga
atgggtggattcctggatcttttgcaggctaagggtctcctaggttcatccaaaggatgt
gcaactgcagataatgaatccttagttgcaaaaaagagtagtgatacctataattgtgat
gctgataataattgtgataatggatttgtggagatttcactagaagcatcatatttggag
agtcaagaccctgtacttcaaaatggtgccaagcatggttttggtaatgctaaacgatta
acacaagaggaagcattgccaacattgtcaggaaatacaactcactgcctttctactgct
gcattggagattactggtgaacctattgagaagctcttcttatggggacaatctgcttgt
gcactcactgttggaagagagcaccatatcctaacttttggtggttttggagggccaggg
aggcacgcaagaagaaattactctcttctggttaatcctgggtcaggattgctgacagaa
ttaaaggttactgggtcgccttcaccacggatgggccatacaattactgtagtaggcaat
gatatttatgttgttggaggcagaagtggtccttcagaaattcttaatgatatctgggtt
ttggaaagatctaacaatagatggtcaaaagtggactgcagtggggattttttccgtcca
aggcaccgacatgctgctgctgcagtagatcgcaaagtatatgtctttggtggactaagt
gatgatggcttatgttcttgcatgaacataatggacacagcaagtatccaatggaatgtg
atttctcctgatgacaaatggccatgtgctcgccactcgcattctctagtgtcctatggt
tcaaaattgtttctgtttggaggtcatgatggtcagagggcactgaatgatttctatagt
tttgatacaacaacacttaagtggaacaaagaaaacactaatgggaaagctccatcccct
agattttcacattgcatgttcatctacaaagactatctcggcatacttggaggttgtcct
attagagaaagcagtcaagaaattgcattgctaaatttaaagcataaaatctggttttat
gtatccattccatcattgagccaatgcctttgtgtccgtagctcatcagtcatcattgat
gatgatcttgtcattgttggtggtggtgcgtcttgctatgcatttggaactagattcagt
cagccaataaaaattgatctgcatttgctggagtcaatatttaagcttgcatacaacaag
gaaaaagaaatgtctgtacaacacggttcagtgtcgaatgtagacttattagaaggacat
gaggaaaattgcaatcccagtgataatgtgaaggtggtgattgatactgctactctaggt
tcatctcctttggtccttcagctagaaaagaagtatgccaaattagcaaaagacattcta
aaaaagtttggatggttggatcttactagaaaagttcgagtaagccaggataacatccat
gttctctttcctgttagtaaaacttttcatgccctaatcactgataagcatctcaaggta
caacctgatgattcatgtgtttttgaagaactattgccgttttctgaaaataagcttttt
ggggccagcatttctcttcagaaagcactagaaattttgttgttatgccgtggttccatt
ctgaaagatgaagtagcgatcagccgcaaagcttctaaaactcctcaaaccatcatgaga
gagcttgtgtctgttctactggataaaaaaggattgcctagccagttattggagcagctg
ccaactaggtgggaaacccttggtgatattattgtgcttccaaaaacttgctttaaggat
ccactgtgggaatcagttagagatgatctttggccactagttgcaaagtcacttggggca
caacgccttgcacgccagggtaaaatcacaccaaatggcacaagagatagcactttagaa
cttctagtgggcaatgacgggtggttgacacatcatgaaaatggcatttgttactcactt
gatgcaacaaaatgcatgttttcttctggtaaccggtctgagaagcttcgcatggggaag
cttgattgtagggatgaagtggtggtggacttgtttgcagggattggatactttgttcta
ccatttcttgtgaaggctaatgccaagttagtctacgcatgtgaatggaatccacatgcc
ctggaggctcttcaacgtaatgtcatggacaaccatgtggcagatcgatgtattatactt
gaaggagataaccgtttgacagcacctaaagggattgctgaccgtgtttgtcttgggttg
ttgccctcgagtgaatgtagctgggacactgctgtgagggctttaagggctgaaggtggc
atgctgcacatacatgggaatgtcaacgactcggatgagtcgctctggttggacaatgtt
gttaagtccatcactaacattgccaaaacacatggactgtcttggaacgtcacggtggag
catgtcgaacgcgtcaaatggtacggtccgcatatacgacatctcgtggttgatgtcaaa
tgccgggcaacctaa
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integrated database retrieval system
