Oryza sativa japonica (Japanese rice): 4343385
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Entry
4343385 CDS
T01015
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4343385
Enzymes [BR:
osa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4343385
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
90S particles
Helicases
4343385
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
4343385
NCBI-ProteinID:
NP_001409099
LinkDB
All DBs
Position
7:complement(join(20153509..20153828,20153922..20154079,20154206..20154684,20154925..20155086,20155158..20155346,20155416..20155739,20155832..20156107,20158689..20159099))
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AA seq
772 aa
AA seq
DB search
MRRPRSRGAAKQTRLREADEIRLLEAWIDAGKPARGTRPPPLSKSSSSPADTAAAKRGAK
GAGGVPSKAAGEHPEYGACARFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDV
LGAAKTGSGKTLAFVIPALEKLYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLHG
FSAACIVGNRKGLDEEKAVINNMNILVCTPGRLLQHMGETTNFDCSQIQILVIDEADQVL
DKNFQEQVDNVVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTL
EQYAMIVPLEQKLNMLWSFIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGR
MKYEVQQAIVAEFKEGHSVLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARY
NKRGKALIFLCPEEEKMLEKLKAAESKIPIHIKKPNTEQLQQISQNIASVLVQYPNLQQL
GKRAFVTYLKSVYLQSDKEVFDLSRFSMENFAAYAASLGLPVTPKIRFVSHKKNVPKKYM
GDIDVKRMKRSSKPEVIEINPQAKSNLIEDDGDYDILYPKEQQTDVNMADGLDDVLYPKV
STADTNNEPEKVTQLGNKSVKKKKLKINVHRPLGTRVKFDDEGHTIPPFASIAEEVGSGD
VIDKDKISQRYAEMLREMQEHDKEDKLEHKRILREKKLQKKLKLKRKRNEEMDAGSENSG
SESDRDQRTASKGKKRYFNSDDEEGSKDAAKDGDVLAQQEALALKLLSKMHS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcccgcggagccgcggcgcggcgaagcagacgcgcctccgggaggccgacgag
atccggttactcgaggcctggatcgacgccggcaagcccgcccggggcaccaggccgcct
cccctctccaagtcctcctcctcgcccgccgacaccgccgccgccaagcggggagccaag
ggggccggaggggtccccagcaaggcggccggcgagcacccggagtacggcgcctgcgcg
cggttcgacgagctgccgctgtcgaataagaccaaggacgggctgcggaaggccgggtac
acggagatgagcgagatccagcgcgccgcgctgccccacgcgctctgcggccgcgacgtg
ctcggcgccgccaagaccggctccggcaagacccttgccttcgtcatcccggctttagag
aagctgtacagagagagatggggtcccgaggatggtgtgggttgcattgttctttctccc
aataaggatttagctgggcaaatttttaatgttttccagaaggtagggaagcttcatggc
ttcagtgctgcttgtattgttggtaatcgcaaaggtcttgatgaagagaaggcagtcata
aacaacatgaatatcttagtatgcacgcctgggcggttacttcaacacatgggcgagacc
acaaactttgattgctcacagatccagattttggtgattgatgaggcagatcaagttctt
gataaaaatttccaagagcaagttgacaatgttgtttctcagcttcccaaagttagacaa
acattgctgttctctgccacacaaacaaaatcagttaaggaccttgcaagggttagcctg
aaggatcctgaatatataagtgtgcatgaggaggctacaacagctactcctgataccctt
gagcagtatgccatgattgtgcctcttgaacagaagctaaatatgctctggagtttcatc
aaacgtcatctaaagtcaagaatactagtattcttatccagtgtcaagcaggtaaaattt
gtgtatgaagttttcaagaagctccgtcctggtatttctttgagatgcatgcatggacgg
atgaaatacgaagtacagcaggccatagtagcagagttcaaagagggacactcggttcta
ttctcaactgatatatttgctagaggattggatatagaggatgttgattgggtcgtacaa
gttgattgcccagaaaacattgctctgtacatccacagagttggccgtacagctcgttat
aacaagagaggaaaagctcttatcttcctttgtccagaggaagagaaaatgcttgaaaaa
ttgaaggcagctgaaagtaaaatacctatacatattaaaaagccaaacacagaacaactg
cagcagatatctcagaatatagcgtcagtgctggtgcaatatcccaatttgcagcaactg
ggtaaaagggcttttgtcacctatctgaagtcagtgtacctccagagcgacaaagaggtg
tttgatctgagcaggttctctatggagaattttgccgcatatgctgcttctcttggtctt
cctgttaccccaaagattcgttttgttagccacaaaaagaatgtgccaaagaaatatatg
ggggatattgatgtgaaacggatgaaaagaagttccaaacctgaagttatagaaattaat
ccacaggccaaaagtaacttaattgaggatgatggagattatgatatcctttatcccaag
gagcagcaaacagatgtaaatatggctgatggtcttgatgatgtcctttatcccaaggtg
tccactgcagatacaaataatgaaccagagaaagtcacacagttgggaaataagtccgtg
aaaaagaagaagctgaagataaacgtgcataggccattgggcacaagggtcaaatttgac
gatgaaggccacactatccctccttttgcatccatagctgaagaagtgggctcaggagat
gtaattgacaaggataaaatttcccagaggtacgcagagatgttgagagagatgcaggag
catgacaaggaggacaagctcgaacacaagaggatcttgcgcgagaagaagctacagaag
aagctgaagctcaagcgcaagaggaatgaggaaatggacgcagggtcagagaacagtggc
tcggagtcggacagagaccagaggactgcctccaagggtaagaagaggtacttcaacagc
gatgacgaagaaggcagcaaagatgcggcgaaggatggggatgttctcgctcaacaggag
gcgttggccctgaagcttttgagtaaaatgcacagttaa
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