Oryza sativa japonica (Japanese rice): 4343580
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Entry
4343580 CDS
T01015
Name
(RefSeq) transcription factor MYB102
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4343580
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4343580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
IL11
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
4343580
NCBI-ProteinID:
XP_015645522
UniProt:
Q0D5I7
Q6Z414
LinkDB
All DBs
Position
7:complement(join(22523194..22524037,22524166..22524295,22524411..22524543))
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AA seq
368 aa
AA seq
DB search
MGRAPCCEKSGLKKGPWTPEEDEKLIAYIKEHGQGNWRTLPKNAGLSRCGKSCRLRWTNY
LRPDIKRGRFSFEEEEAIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
IDPVTHAPRLDLLDLTSLLKPAAAAAYYPTQADLDTLRALEPLAGYPDLLRLASAILPAA
TTTGAAAAAAAEQAQLLLPWLLQAQMAQQQQQVTPPPPPPPQAAATEQFLQATSTACHQM
PGLVHASPTQQLAQQPQDHMAAATCHRRGAVQHPSYDNQLDYVPALMQMASDASNLQQWS
STVSSSNNHNVNSGVSTPSSSPAAAGQINSSSTTTTTTYGLNASGDVDDAGLLINMHLSE
LLDVSDYM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggcgccgtgctgcgagaagagcgggctgaagaaggggccgtggacgcccgag
gaggacgagaagctcatcgcctacatcaaggagcacggccagggcaactggcgcacgctc
cccaagaatgccgggctctcgaggtgcgggaagagctgccggctgcggtggacgaactac
cttaggccggacatcaagcgtggtcgcttctccttcgaggaggaggaggccatcatccag
ctccacagcatcctcggcaacaagtggtcagcgatcgcggcgcggctgccgggccggacg
gacaacgagatcaagaactactggaacacgcacatccgcaagcgcctcctccgcatgggc
atagaccccgtgacccacgcgccgcgtctcgacctcctcgatctcacctccctcctcaag
cccgccgccgccgccgcgtactaccccacgcaggccgacctcgacacgctccgcgcgctc
gagccgctcgccggctacccggacctgctccgcctcgcctccgccatcctccccgccgcc
acgacgaccggcgcagccgccgccgccgccgccgagcaggcgcagcttctcctgccgtgg
ctgcttcaggcgcagatggcgcagcagcaacagcaggtgacgccgccgccgccgccgccg
ccgcaggccgcggcgaccgaacagttcttgcaggccaccagcaccgcctgccaccaaatg
ccaggcctggttcacgccagcccgacgcagcagctggcgcagcaaccgcaggatcacatg
gcggcggcgacctgccaccgccgcggcgccgtgcagcacccgagctacgacaaccagctc
gactacgtgccggcgctgatgcagatggcgtccgacgcgtccaacctgcagcagtggagc
agcacggtctcgagtagcaacaaccacaacgtcaactccggcgtgtccacgccgtcgtcg
agcccagcagccgccggacagatcaactcatcctctacgacgacgacgacgacgtatggc
ttgaacgcgagcggtgacgtcgacgacgctgggctgctcatcaacatgcacctatccgag
ctcctcgacgtgagcgactacatgtaa
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