Oryza sativa japonica (Japanese rice): 4343671
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Entry
4343671 CDS
T01015
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4343671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4343671
Spliceosome [BR:
osa03041
]
Complex C
Other components
Step II factors
4343671
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
4343671
NCBI-ProteinID:
NP_001411185
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All DBs
Position
7:complement(join(23317529..23317936,23319181..23320089))
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AA seq
438 aa
AA seq
DB search
MDLLKRELEKKRKAATADFGGKSFVRRSELEQKQLQKRRHEEHRQLLSKAPPATSSASAA
GSDPSNPNADPAQSSAANPNPNSSSSAAAASVPPGLAGKKTAQDEALLSEERRIDELDLP
RHEVVRRLRILREPVTLFGEDDADRLARLKFVLKSGVIDDIDDLDMTEGQTNDFLRDMVE
LRKRQRAGRDTYVKGKGKRAGGGDGGEGGAGGDNADDGDGDGRRSGDDADADKDSKRMKT
KFEELCDEDKILVFFKKLLIEWNQELDEMPELEKRTAKGKSMVATFKQCARYLSPLFEFC
RKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKI
YTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQALLSEEKD
PGNPPSEDRLRLMPASKE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctgaagagggagctggagaagaagcggaaggcggcgacggccgacttcggc
gggaagagcttcgtgcggcggtcggagctggagcagaagcagctccagaagcggcgccac
gaggagcaccgccagctcctctccaaggccccgccggcgacctcctccgcctccgccgcg
ggctccgaccccagcaaccccaacgccgacccggcccagtcctccgccgcaaaccctaac
cctaactcctcctcgtccgccgccgccgcgtccgtcccgccgggcctcgcggggaagaag
accgcgcaggatgaggcgctcctctccgaggagcgccggatcgacgagctcgacctcccg
cggcatgaggtggtgcggcgcctccgcatcctgcgcgagcccgtcacgctgttcggggag
gacgacgccgaccggctcgcccgcctcaagttcgtgctcaagtccggcgtgattgacgac
atcgacgaccttgacatgacagaggggcagacgaacgacttcctccgtgacatggtcgag
ctccgcaagcggcagagggctggccgggacacctatgtcaagggcaagggcaaacgagcg
ggcggcggtgatggcggcgagggtggcgctggcggggataatgctgatgatggggatggg
gacggccggaggagtggggatgatgctgatgcggacaaggactcgaaacggatgaagacc
aagtttgaggagctgtgtgatgaggacaagatcttggtgttcttcaagaagctactcatt
gagtggaaccaggagcttgatgagatgccggagctggagaagaggacagcaaagggcaag
tcgatggtcgcaaccttcaagcaatgtgcgcggtatctcagccccctgtttgagttttgc
aggaagcaggttcttcctgatgacatccgtcaagcattgctcgttattgttgaatgctgc
atgaagcgtgattatttagcagcaatggaccaatacatcaagctggccattggcaatgca
ccatggcctattggtgtcactatggttggtatccacgagcgttcggcccgagaaaagatc
tacacaaacagtgtggcgcacattatgaacgatgagaccactcgcaagtaccttcagtca
atcaagaggcttatgaccctttgccagcgacgttatcctgctctgccctcaaaatcggtg
gagttcaacagcctggcaaatgggagtgacctgcaggcccttttgtcagaggagaaagat
ccaggaaaccctcctagcgaggataggcttcgactcatgccagcgtcaaaagagtga
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