Oryza sativa japonica (Japanese rice): 4343721
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Entry
4343721 CDS
T01015
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00900
Terpenoid backbone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
4343721
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
osa01006
]
4343721
Enzymes [BR:
osa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
4343721
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
4343721
2.5.1.29 geranylgeranyl diphosphate synthase
4343721
Prenyltransferases [BR:
osa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
4343721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
4343721
NCBI-ProteinID:
XP_015647986
UniProt:
Q7XI92
Q0D557
Structure
PDB
PDBj
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All DBs
Position
7:complement(join(23737199..23737621,23737928..23738605))
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AA seq
366 aa
AA seq
DB search
MAAFPPLAASRVRISPLIPAAAMAGTAGAAAASYAQHRRRFCAIVATAAASPVPAAAAAA
ATGFDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAV
VGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALL
SLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVP
LERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKS
SEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANY
IAYRQN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttccccccgctcgccgcctcccgcgtccgcatctcccctctcatccccgcc
gccgcgatggctgggacagcaggggcggcggcggcgtcgtacgcgcagcaccggcggagg
ttctgcgccatcgtggcgaccgcggcggcgtcaccggtgccggccgcggcggcggcggcg
gcgacggggtttgattttaacgcgtatatgggtgagaaggctgcggcggtgaaccgggcg
ctggacgcgtcgatcccggcggacgagccgcccgcggcgctccacgaggcgatgcggtac
gcgctgctggcgggcgggaagcgggtgcggcccgcgctgtgcctggcggcgtgcgcggtg
gtcggggggcgggaggcctgggcgatgcccgccgccgccgccgtcgagatggtgcacacc
atgtcgctcgtccacgacgacctcccctgcatggacgacgacgacctccgccgcgggaag
cccacctgccacgtcgtctacggggagcccatcgccgtgctcaccggcgacgcgctgctc
tccctctccttccaccacatggccaggttcgactcctaccctccggacatcgacgctgac
aagcaccccgcccgcgtcgtccgcgccattggcgagctcgcgcgctgcataggctccgag
ggcctagtcgccggccaggttgttgatcttgagatgactggatcgaccgaaactgtacct
cttgaacgtcttgagtacatccatctccacaaaactgctgcattgcttgaggcatcagtg
gttattggggcaatcttgggaggtggctctgatgagcagattgaaagtttgcgcatgtat
gcgagatcgataggattgttgttccaggttgttgatgatatacttgatgtgaccaagtct
tctgaggagctcggcaagacagcagggaaggacttggcgagtgacaagacgacatacccg
aaattacttgggctggagaaatcacgggagtttgcagaaaagttgctttctgatgcaagg
gaacaactttcaggatttgatcaagagaccgcagcaccacttctgcacctggccaattat
attgcctatcggcagaactga
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