Oryza sativa japonica (Japanese rice): 4343753
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Entry
4343753 CDS
T01015
Symbol
OsGRAS-38, OsJ_24926, OsSHR1, SHR1
Name
(RefSeq) protein SHORT-ROOT 1
KO
K27743
protein SHORT-ROOT
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4343753 (OsGRAS-38)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Other transcription factors
GRAS
4343753 (OsGRAS-38)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
GRP
Motif
Other DBs
NCBI-GeneID:
4343753
NCBI-ProteinID:
NP_001409177
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All DBs
Position
7:24093136..24094944
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AA seq
602 aa
AA seq
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MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG
GGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQ
QPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASS
GAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGL
FARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEV
AAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQ
RVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLR
GVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFG
EGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRM
RSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAW
RP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctgtttaggttggttagcctccaagccgcctccgagcagcagcagcagcag
cagcagtcggcgtcctacaactcgaggagcacgacgtcgagcgggtccaggtcgtcgtcg
caccagacgaacgcgtcctacagctactaccaccacagcagcaacagcggcggcggcggc
ggaggcggcggagggtactactacggcggccagcagccgccgccgtcgcagtactactac
ctggagccgtaccaagaagaatgcggcaacgccccacaccaccagctttacatggatgaa
gacttctcctcctcgtcgtcgtcgaggcacttccaccacggcgcgcgggtgcagcagcag
cagccgccggcgtcgtccacgcccacggggacggcgccgacgccgccgctgtcgacctcg
tccaccgcggcgggcgccgggcacggcctgttcgaggcggcggacctgtcgttcccgccg
gacctcaacctcgacttctcgtccccggcgtcgtcgtccggcggcgggacagcgtcgtcg
ggcgcggttgggggcggcggcggcgggaggtgggctagccagctgctgctggagtgcgcg
cggtcggtggccgcccgcgacagccagcgcgtgcagcagctcatgtggatgctcaacgag
ctcgcgtcgccgtacggcgacgtggagcagaagctggcttcctacttcttgcaggggctg
ttcgctcggctcacggcgtccgggccgcgcacgctgcgcacgctcgccgcggcgtccgac
cggaacacgtcgttcgactcgacgcggcgcacggcgctgcggttccaggagctcagcccc
tggtcctcgtttgggcacgtcgccgccaatggcgccatcctcgagtccttcctggaggtc
gccgccgcggcgtcgtcggagacgcagcggttccacatcctcgacctgagcaacacgttc
tgcacgcagtggccgacgctgctggaggcgctggccacgcggtccgccgacgagacgccg
cacctctcgatcaccaccgtggtgtccgccgcgccgtccgcgcccacggcggcggtgcag
cgcgtcatgcgggagatcgggcagcgcatggagaagttcgcgcggctcatgggcgtgccc
ttccgcttccgcgccgtgcaccactccggggacctcgcggagctcgacctcgacgcgctc
gacctccgcgagggcggcgccaccaccgcgctcgccgtcaactgcgtcaactcgctgcgc
ggcgtggttcccggcagggcccgccggcgcgacgcgttcgcggcgtcgctccgccggctg
gacccgcgggtcgtcaccgtcgtcgaggaggaggcggacctggtggcgtccgatcccgac
gcgtcgtcggcgacggaggaaggcggcgacacggaggcggcgttcctcaaggtgttcggc
gagggcttgcgcttcttctcggcgtacatggattcgctcgaggagagcttccccaagacg
agcaacgagaggctggcattggagaggggagcagggcgcgccatcgtcgacttggtctcg
tgcccggcgtcggagtcgatggagcggcgggagacggcggcgtcgtgggcgcggcgcatg
cggtcggccgggttctctccggtggcattcagcgaggacgtcgccgacgacgtgcgatcg
ctgctgcgccggtacagggaagggtggtcgatgcgcgaggccggcacggacgactcggcg
gccggagccggcgtcttcctcgcgtggaaggagcagcctctggtgtgggcaagcgcgtgg
cggccatga
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