Oryza sativa japonica (Japanese rice): 4344040
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Entry
4344040 CDS
T01015
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4344040
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
4344040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Occludin_ELL
Tox-PLDMTX
Prominin
Hydro_N_hd
ABC2_membrane_3
DNA_repr_REX1B
GCIP_C
CAP_N
DUF6988
Motif
Other DBs
NCBI-GeneID:
4344040
NCBI-ProteinID:
XP_015646134
UniProt:
Q0D4A7
Q8H5R6
LinkDB
All DBs
Position
7:join(26728316..26728392,26728609..26728701,26728941..26729034,26729129..26729166,26729306..26729397,26729486..26729565,26729639..26729695,26729812..26729904,26730073..26730147,26730574..26730675)
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AA seq
266 aa
AA seq
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MASDVPMSPELEQVDGEIQDIFRALQNGFQKMDKIKDSNRQSKQLEDLTGKMRECKRLIK
EFDRILKEDEKKNSADVNKQLNDKKQLMIKELNSYVTLRKTYQSSLGNKRIELFDTGNDQ
VAEDNTVQMASEMSNQQLMDAGRKQMDQTDQVIERSKKVVAQTVEVGSQTAAALSQQTEQ
MKRIGNELDSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNK
NIRDIPGLAPPAQNRKLLSIESFGSL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagccccgagctggagcaggtggacggcgagatccaggac
atcttccgcgcgctccagaatgggttccagaagatggacaagatcaaggactccaacagg
cagtccaagcagctggaagatctcaccgggaagatgagggagtgcaagcgcttaatcaaa
gaatttgatcgtattctcaaagaggatgagaaaaagaactcggctgatgtcaacaagcag
ctaaatgataagaagcagctgatgatcaaagaattgaattcctatgtcacattgaggaaa
acgtaccaaagcagcctgggtaataagaggattgaactatttgatactggtaatgatcag
gtggccgaggacaacactgttcaaatggcatcagaaatgtcaaatcaacaactcatggat
gccggaaggaaacagatggaccaaacagatcaagttattgagcgttcgaaaaaggttgtt
gcacaaaccgttgaagttggatctcaaactgctgcagctctatcacaacaaacagaacaa
atgaagagaattggcaatgagctagactcggttcacttttcactgaagaaggctagccaa
atggtgaaagagattggtcgccaggttgcaactgacaaatgcatcatggcattcctattt
ctgatagtctgtggtgtgattgcaatcattgttgttaagattgtcaaccctcacaacaag
aacatcagagacatcccaggactggcaccacctgcgcagaacaggaagctcttgtccata
gaatctttcggaagcctctga
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