KEGG   Oryza sativa japonica (Japanese rice): 4344076
Entry
4344076           CDS       T01015                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4344076
   03400 DNA repair and recombination proteins [BR:osa03400]
    4344076
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4344076
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4344076
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    4344076
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 DEAD ResIII zf-RING_5 zf-RING_UBOX zf-rbx1 Prok-RING_4 zf-ANAPC11 zf-RING_4 HDA2-3 zf-Nse zf-C3HC4_4 TRAF3_RING AAA_34
Other DBs
NCBI-GeneID: 4344076
NCBI-ProteinID: XP_015644907
UniProt: Q8GSA1
LinkDB
Position
7:join(26961750..26963090,26963271..26963583,26964532..26965343)
AA seq 821 aa
MASTSRRGGGEDDDDEPYLLGFIVANAVGLQYYQGGRAITRRESVGLVREPHNPHDANAI
RVDNARGEKIGHIGRRAAAALAPLLDAGHVAAAHGIVPKPASKRLYSLPCQVHLFARPPH
AALVAAALAASGIDLIHVDHPEFALSESAIVQEQQTKRSRGDVDRLFSHVGKGGRARIAP
MEAPRDVVVSELFEHQKAALGWLVHREESCDLPPFWEEDNDGGFKNVLTNQKTNERPPPL
KGGIFADDMGLGKTLTLLSLIGRSKARNVGGKKARGAKRRKVEEAVEEESRTTLVVCPPS
VFSSWVTQLEEHTKTGSLKVYLYHGERTKEKKELLKYDIVITTYSTLGQELEQEGSPVKE
IEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPIQNSSFDLYPLMAFLRFQPF
SIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTKETESGSKSLVSIPPKTVLACY
IELSAEEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCNDIALCPLDLK
SWLPGSGSSLEDVSKNPELLKKLASLVDDGDDFECPICLAPPAKTVITSCTHIYCQTCIM
KILKSSSSRCPICRRSLCKEDLFIAPEIKHPDEDSSVNLDRPLSSKVQALLKLLRRSQSE
DPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVL
LASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKDSIEE
RMLELQERKKKLISGAFGRKKGGKEHKEIRVEELQMMMGMK
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggcctccacctcccgccgcggcggcggcgaggacgacgacgacgagccctacctcctg
ggcttcatcgtcgccaacgccgtcggcctccagtactaccagggcggccgagccatcacc
cgccgcgagagcgtcggcctcgtccgggagccccacaacccccacgacgccaacgccatc
cgcgtcgacaacgcccggggcgagaagatcggccacatcggccgccgcgccgccgccgcc
ctcgccccgctcctcgacgccggccacgtcgccgccgcccacggcatcgtccccaagccc
gcctccaagaggctctacagcctcccctgccaggtccacctcttcgcccgcccgccccac
gccgccctcgtcgccgccgccctcgccgcctccgggatcgacctcatccacgtcgaccac
cccgagttcgccctctccgagtccgccatcgtgcaggagcagcagaccaagaggtctcgc
ggggatgtcgataggctgttctctcatgtggggaagggagggagagctcggattgcgccc
atggaggcgccgcgggatgtggtggtgtccgaactgttcgagcaccagaaggcggcgctg
gggtggctggtgcaccgtgaggagtcatgcgaccttccaccattctgggaggaagataat
gatgggggatttaagaatgttcttacaaatcagaagacgaatgagagaccgccgccgttg
aagggtgggattttcgctgatgatatggggctagggaagactctcacgctgttgtcgctg
atcggaaggagtaaagctcgcaatgtaggtgggaagaaggctagaggggcgaaaaggagg
aaggttgaggaggcggtggaggaggagtcaagaacaacgcttgtggtgtgcccgccatcg
gtgttctcatcttgggtgacacaactggaggagcacacgaaaaccggtagcttgaaggtg
tatttgtaccatggagagcggacaaaagagaagaaagagctgttgaaatatgacattgtg
attaccacttatagcaccttggggcaagaacttgagcaggagggctcaccggtaaaggaa
attgaatggttccgtgtgattctggatgaggcccatgtgatcaagaactctgcagcacgc
caaaccaaggcggtgattgctttgaacgcggagaggcggtgggtggtcacagggacgccc
attcagaacagctcatttgatctttacccgctcatggcatttttgagattccaaccattc
tcaatcaagagctactggcagagcttgatccagctccccttagagagaaagaataacgga
attgggttggcacgattgcagagcctcctaggtgctatttccctgcgcagaaccaaagag
acagagagtggtagcaaaagcttggtcagcattccgcccaaaactgttttagcttgttat
attgagctttctgcagaggaacgtgagtactatgaccagatggaattggaagggaaaaac
aaactgcgggagtttggtgacagggattcgattttgcgtaattactcaactgtgctttat
ttcattctgaggctccgccagctctgcaatgacatagcactatgcccattagacctgaaa
tcatggcttcctggcagtggcagctcccttgaagatgtgtctaaaaacccagagctgttg
aagaagctggcctcattggttgacgatggagatgacttcgaatgtccgatttgtctcgct
ccaccagccaaaaccgtcataacgagctgcacgcacatatactgccagacttgcatcatg
aaaatcctcaagagctctagttcccgctgtccaatatgccggcgctcgctatgcaaagaa
gacctctttattgcgccagagattaaacatcccgatgaggattcctcagtcaatcttgat
agacctctttcttccaaggtgcaagccttgctgaaactactgaggcgttcacagagcgaa
gaccctttgtcaaagtctgttattttctctcagttcaggaagatgctgatcttgcttgaa
gggccacttaaagcagcaggctttaacatactacgactcgacggctctatgacggcgaag
aagaggtcagaggttatccgccaattcggatgcgttggccctgattctccgaccgtgctg
ctggccagcctgaaggctgcgggagccggcgtgaacctgaccgcggcatcaacggtgtac
ctcttcgacccttggtggaaccctggggtggaggagcaggccatggacagggtgcaccgg
atcgggcagaccaaggaggtgaaagtggtgaggctgatcgtgaaggatagcatcgaggag
aggatgctggagctgcaggagaggaagaagaagctgattagcggcgcatttggtaggaag
aaaggaggcaaggagcacaaggagatccgtgttgaagagctccagatgatgatgggaatg
aaatga

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