Oryza sativa japonica (Japanese rice): 4344139
Help
Entry
4344139 CDS
T01015
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1
KO
K10523
speckle-type POZ protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344139
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
4344139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BACK_BPM_SPOP
BTB
TRAF-mep_MATH
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
4344139
NCBI-ProteinID:
XP_015647312
UniProt:
Q8H3E5
B9FUL9
LinkDB
All DBs
Position
7:join(27772945..27773447,27775064..27775412,27775957..27776233,27777218..27777393)
Genome browser
AA seq
434 aa
AA seq
DB search
MGAGRACRGGPSSSSPAAAAAAVGRPFPPIAASCPFSSSSAAAAAPAAPSETASTSVTKT
VNGSHHFKIAGYPLAKGIGVGKYIASECFTVGGYDWAIYFYPDGKSPEDGAAYVSLFIAL
ASEGTDVRALFELTLVDQSGKGQDKVHTHFGRSLEGGPYTLKYRGSMWGYKRFFKRSALE
TSDYLKDDCLLVNCTVGVVQSHTEGPKIYTIPVPPSNMSQHIGQLLTDGKRTDITFEVDG
EVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITIEDMEASVFKALLHFMYWDELPDIEE
LTGLNTTWVSTLMAQHLLAAADRYALERLKLLCELKLCEDVAINTVANTLALAEQHHCYQ
LKTVCLRFVALPENLKAVMQTDGFDYLQQSCPSLLTELLEYVAKVGEHSVSPCLYSNEVL
DGGDANGRRVKPRI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctggccgggcttgccgcggcggcccctcctcctcctcccccgccgctgccgcc
gctgcggtggggcggccgttccctccgatcgccgcttcgtgccccttctcgtcgtcttcg
gcggcggctgcggcccccgcggcgccttccgagacggcgtcgacgtcggtgaccaagacc
gtgaacgggtcgcaccacttcaagatcgccgggtacccgctggccaaggggatcggggtc
gggaaatacatcgcctccgagtgcttcaccgtcggcggctacgactgggcgatctacttc
taccccgacgggaagagccccgaggatggcgccgcctacgtctcgctcttcatagcgctc
gccagcgagggcaccgacgtccgcgcgctcttcgagctcacgctcgtcgaccagagcggc
aaggggcaggacaaggtgcacacccactttgggaggtcgctcgagggcgggccatatacc
ctcaagtaccgggggagcatgtggggttacaagcgtttcttcaaacggtctgccttggaa
acatcagattatcttaaagatgattgccttttggtgaattgtactgttggtgttgtccaa
tcacatactgaagggccaaagatatatacaataccagtgccaccatccaatatgtctcag
catattggccagctactgacggatggaaagagaactgatattacatttgaagttgatgga
gaggtgttccctgctcacaaggttgttcttgcagcccggtcaccagttttcagggcacag
cttttcggtccaatgaaggataaaaacatgaagcgtataacgattgaggatatggaggct
tcagtttttaaggccttactccattttatgtactgggatgagttgcctgatatcgaagag
cttactggcctaaatacaacttgggtatccactttgatggctcagcatttacttgcagct
gcggatcgttatgcattggagagactaaagttgctctgtgagctcaagctttgtgaagat
gttgcaataaacacagttgcaaacactttggcactggctgaacagcaccactgttatcag
ctaaaaactgtttgcctgagatttgtggctttgcctgagaatttaaaagctgtcatgcaa
accgatgggtttgattatttgcagcaaagctgcccatccttgctgaccgagcttctggag
tatgtggccaaggtaggggagcattcggtgagcccctgcttgtattcgaacgaagtcctt
gatggtggcgatgccaatggaagacgtgtgaaaccgcggatttaa
DBGET
integrated database retrieval system
