Oryza sativa japonica (Japanese rice): 4344172
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Entry
4344172 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4344172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344172
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4344172
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
4344172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
FAIM1
Motif
Other DBs
NCBI-GeneID:
4344172
NCBI-ProteinID:
XP_015644782
UniProt:
Q0D3Y1
Q7XAM5
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All DBs
Position
7:join(28036939..28037139,28037582..28037968,28038360..28038680)
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AA seq
302 aa
AA seq
DB search
MASVTYLDDAHSEVIDPPKNEEMLDVTELVDDHTQHSPKPNAMVSGNVRELLECPVCLNA
MYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQNFGCL
GIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIQYLVSHLKDDHKVDMHNGSTFNHRY
VKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDAEAKNYSYSL
EVGGSGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDKKELKLRVTGRIWK
EQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttacttatcttgatgatgcccattctgaagttatcgatcctccaaagaac
gaggagatgctggatgttactgaacttgttgatgatcacacccagcattcaccaaaaccg
aatgcgatggtctctggcaatgtgcgtgagctactggaatgccctgtgtgtctaaatgcc
atgtatcctccaattcatcagtgctccaatggtcatactctatgttccggatgcaagccc
agggttcacaaccgctgcccaacttgcagacatgaattgggtaacataagatgccttgct
ctggaaaaggtagctgcatcactagagcttccatgcaaatatcagaactttgggtgcttg
ggcatatatccttattactgcaagctgaagcatgagtcacagtgccaatacaggccctat
acttgcccatatgctggatctgaatgcactgttgctggtgacattcagtatctagtaagt
cacttgaaagatgatcataaggttgacatgcacaacggaagcaccttcaatcaccgttat
gtcaaatcaaatcctcatgaagttgagaatgctacctggatgctcacggttttcagctgt
ttcggccagtacttttgcctgcactttgaggcattccagttgggcatggcacctgtctac
atcgccttcctacggttcatgggagatgatgcagaagccaagaactatagctacagcctg
gaggtcggaggcagtggtcggaagatgacctggcaaggcgtcccccgaagcatcagagac
agtcacaggaaagttcgggacagctacgacggccttatcatccagcggaacatggccttg
ttcttctccggtggcgacaagaaggagctcaaactgcgtgtcaccggaaggatttggaag
gagcagtga
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