Oryza sativa japonica (Japanese rice): 4344194
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Entry
4344194 CDS
T01015
Name
(RefSeq) RNA-binding protein BRN1 isoform X3
KO
K13207
CUG-BP- and ETR3-like factor
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4344194
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4344194
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
4344194
NCBI-ProteinID:
XP_015646756
UniProt:
Q7XAN8
A0A0P0X9U2
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All DBs
Position
7:complement(join(28211127..28211236,28211323..28211466,28211557..28211884,28213279..28213464,28213619..28213707,28213801..28213932,28214089..28214140,28214987..28215069,28215155..28215314))
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AA seq
427 aa
AA seq
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MAGDGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVC
SSREEADKAIAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSA
LFSQYGNIRQLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVV
KLADTEREKQARKAQKAQAQPSKPLRFYLFPQLLSISGAPQMSFLPPYNVLDYKVPGHYG
HTKNPLALYSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLHYP
VSYAGALVGDTPQYFSDGKVNIPNSHSNHASSAANTKIGSKIEGPPRANLFVYDIPQEYG
DEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGKMLK
VQLKRET
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccggagatggggaggatggcggcgagagggtgcggctgttcgtcggccaggtgcca
cgcagcatggcggaggaggacatcctcgccgtggtccgcgccgccgcacgcgccgacgac
gccaccgtcatccgcgaccgcgccaccggcgcctcccgcggttgctgcttcgtggtgtgc
tcgtcgagggaggaggcagacaaggccatcgccgcgtaccacaacaagtgcaccctccca
ggagcgtccagggcaatgcaggtaaaatacgcggacggcgagctggaacgattagccgca
gagcagaagcttttcattggcatgcttccaagggatgtgaaggagaatgaagtttctgca
ttgttttcgcagtacggaaatattagacaactgaaggtactgagaagtccacagaaaaca
agaaaagctgcagcctgtgctatcctggaatttggaagcaaagaacatgctagagcggcc
attgaagctttgaatggcacacgtgttgtgttcaatggttcaagtgcgactttggttgtt
aagttggctgacactgaaagggaaaagcaagctagaaaggcacagaaagctcaggctcaa
ccttctaagcccttaagattttatctcttcccccagctgctatcaatatctggagcacca
cagatgagctttcttcctccatataatgtattggattacaaggtaccagggcattatgga
cacacgaagaacccattggcattgtacagcactatgtacccacatgtcaatcaaggaaat
ttactccagggactcaacacaaatatatttccaggaacagatcctaaaatttcgaacctg
attcaatctgctggatacatacaacctccttaccctgatttgtcaggtcttcattaccca
gtatcatatgcaggtgccttagtgggagatacaccacagtatttctctgatggtaaggta
aacataccaaacagtcatagcaatcatgcctcatctgcagcaaacacaaagatagggagt
aagattgaaggacctcctagggctaatttatttgtctatgacatccctcaagaatacggt
gatgaagatctggcaaatctatttcaagaatttggtaggatcttgagtaccaaggttttc
attgacagagctactggtgtcagtaaatgtttcggctttgttagttatgacacaccagca
tcagctcaggctgctatcaggaggatgaatggctcacagataggtggcaaaatgctcaag
gtacagctcaagagggaaacatga
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