Oryza sativa japonica (Japanese rice): 4344254
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Entry
4344254 CDS
T01015
Symbol
OsJ_25542
Name
(RefSeq) probable E3 ubiquitin-protein ligase BAH1-like 2
KO
K16275
E3 ubiquitin-protein ligase BAH [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344254 (OsJ_25542)
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4344254 (OsJ_25542)
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4344254 (OsJ_25542)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_3
SPX
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
4344254
NCBI-ProteinID:
NP_001409214
LinkDB
All DBs
Position
7:complement(join(28680827..28680932,28681097..28681155,28681264..28681401,28681620..28681871,28682319..28682563,28683749..28683914))
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AA seq
321 aa
AA seq
DB search
MKFAKKYEKYMKGMDEELPGVGLKRLKKLLKKCRSDLQSHENDGSSAGRCPGHCSVCDGS
FFPSLLNEMSAVIGCFNEKAKKLLELHLASGFKKYTMWFTSKGHKSHGALIQQGKDLVTY
AIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLRRSKKN
NGAMELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCSICLDTVFDPVALSCGHIYCYLC
SCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVHLDELNMLLSYSCPEYWEKRIQMER
VERVRLAKEHWESQCRAFLGM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgccaagaagtacgagaagtacatgaaggggatggatgaggagctcccgggc
gtggggctgaagcggctcaagaaattgctcaagaaatgccgctctgacctccaatcccac
gagaacgacggctcctccgccggccgctgccccggccattgctctgtatgtgatgggagt
tttttcccatctcttctcaatgagatgtcagccgttattggctgcttcaatgaaaaggcc
aagaagcttctcgagttgcacctggcatcaggtttcaagaaatatacaatgtggttcacc
agcaagggtcacaagagccatggggcattgatacagcaaggcaaagacttggttacttat
gcaattataaatgccgtggccatgaggaaaattttaaagaaatatgacaagatacattac
tcgaagcaagggcaggaattcaaagctcaagcccagagtctgcatattgaaatacttcaa
tccccatggctctgtgagctgatggctttctacatgaacttgagaagaagcaagaagaac
aacggtgctatggagctctttggggattgttctctcgtattcgatgatgacaaaccaaca
atttcatgcaacctctttgactctatgcgtgtcgacattagcttgacatgttcgatttgc
ttggataccgtgtttgatccagttgctctttcctgtggtcacatatattgctacttgtgc
agctgttctgctgcatccgttacgatcgttgatgggctgaagtctgccgagcgcaaatca
aagtgcccactgtgccgacaggcaggagtctttcctaatgctgtacacttggatgagctg
aacatgctactaagctatagttgtccagagtactgggagaagagaatacagatggagcgg
gttgaacgtgttcgtctggctaaggaacactgggagtcacagtgcagggcattcttgggc
atgtga
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integrated database retrieval system
