KEGG   Oryza sativa japonica (Japanese rice): 4344270
Entry
4344270           CDS       T01015                                 
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic isoform X1
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4344270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4344270
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4344270
   03029 Mitochondrial biogenesis [BR:osa03029]
    4344270
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     4344270
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   4344270
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    4344270
 Prokaryotic type
    4344270
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    4344270
SSDB
Motif
Pfam: tRNA-synt_1b
Other DBs
NCBI-GeneID: 4344270
NCBI-ProteinID: XP_015647518
LinkDB
Position
7:complement(join(28818784..28818804,28820293..28820352,28821992..28822097,28822293..28822438,28822907..28822989,28823147..28823252,28823758..28823890,28823974..28824257,28826125..28826284,28826662..28826837))
AA seq 424 aa
MLARAFGLVGKTWKRTPTMSVEASASPRRRSQMPQQQLCHLHGSTPSQRQKFPEEQLPGD
TVEGSFDLRFAALKSIGEDRVNDRELKLLLKKKHAPICYVWCDPCPWMHISQGIMKTLNI
NKMVESGFKVKILMADWFSQMNSEISGNLNKMRTVGRYNIEMWKATGMALDKVDLVWLSD
EIRQHGDEYWPIVMDIARTNSVRRIKSTCRSSYYCLPSRFCGSRNSYAIGKLNVDEIFYI
CLQCASILFQKADIWLLGMEQHDANLLARQYYKHFKKKNKAIAVLDNMLPNLLQYPQMEN
RRHPAWAIFMEDDKEDICFKMEKAFCPPKLAEGNPCLEYIKYIILPWFGMFEVVQKKGNG
GKKTFLSMEELTADYESGALHPADVKLALEKSLNEILQPVRDHFGRNGEAKDLVEAIGEC
YGAD
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgctagcgcgggcgtttggcctcgtgggcaaaacatggaagcgaacgccgactatgtcc
gtcgaggcttccgcctcgccgcgccgccgctcccagatgccacagcagcagctttgtcat
ctccacggcagcacgccgtcacaacggcaaaagttccccgaagaacagctcccgggggat
actgttgaggggagttttgacctgaggtttgcagcactgaagagcattggggaggatcgg
gtcaacgatcgtgagcttaagttactgctaaagaagaaacatgcccccatttgttatgtt
tggtgtgatccatgcccctggatgcacatttctcaggggatcatgaagacactcaatatt
aataaaatggttgaatctggtttcaaagttaaaatcttaatggcagactggttttcccag
atgaacagtgagattagtggcaatctaaataagatgcggactgttggcaggtacaatatt
gagatgtggaaagcaactggcatggctcttgataaagtagatctagtctggttgtcagat
gaaatacgtcaacatggtgatgagtactggccaattgtcatggatattgcaaggacaaac
agtgtgcgtagaataaaaagtacatgcaggtcctcttattactgtttacctagcagattt
tgtgggagtagaaattcttatgcgattggaaaattaaatgttgatgagattttttacatt
tgcttgcagtgtgctagcatattatttcagaaggcagacatatggctgttgggaatggaa
cagcatgatgccaacttattagctagacaatattataagcatttcaaaaagaagaataag
gcaattgctgttttggacaatatgcttcctaatttattacaataccctcaaatggagaac
aggaggcatccagcttgggctatcttcatggaagatgataaggaggatatatgttttaaa
atggaaaaagctttctgccctccaaaactagcagaaggcaatccatgtttggagtacata
aaatatatcatcttgccttggtttggaatgtttgaggtggtccagaagaaagggaatggt
ggcaaaaagacttttctgagcatggaggaacttacagctgattatgaaagtggcgctctg
catcctgctgatgtgaagctggcccttgaaaagtcattgaacgagatattgcagcctgtt
cgtgatcactttggaaggaatggtgaagcaaaggatctagtggaagctatcggggaatgc
tacggtgctgactga

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