Oryza sativa japonica (Japanese rice): 4344335
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Entry
4344335 CDS
T01015
Name
(RefSeq) probable E3 ubiquitin-protein ligase ATL45
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344335
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4344335
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4344335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_16
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
RINGv
zf_RING_Vps8_fungal
SLX1_C
Motif
Other DBs
NCBI-GeneID:
4344335
NCBI-ProteinID:
XP_015645790
UniProt:
Q0D3H7
Q8LIH1
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All DBs
Position
7:complement(29386663..29387208)
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AA seq
181 aa
AA seq
DB search
MEILVSALLLLLVPPLSALLAVAAPSLAWPSGSSSVRKLIAKKVAPEQAARDELLRVARY
SSASAAAAASAVQQPGGSESSRPAAAAADDGGRPDQCAVCLSGIEEGDEVRELRCRHLFH
RGCLDRWWLSARPPATCPLCRCRLLQSPSAAADDGDGDGEEDSDSDMVMFMAYLRSSSTW
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggagatcttggtgagtgcactgctcctgctcctcgtgccacccttgtccgccctcctc
gccgtcgccgcgccgagcctcgcgtggccgtcggggtcgtcgtcggtgaggaagctgatc
gccaagaaggtggcgccggagcaggcggcgcgcgacgagctgctgcgcgtggcgcggtac
agtagcgctagcgccgccgctgccgctagtgctgtccaacaaccaggcggcagcgagagt
agtcgtccggcggcggcggcggcggatgatggtgggcggccggatcagtgcgcggtgtgc
ctgagcggcatcgaggagggcgacgaggtgagggagctccggtgccggcacctgttccac
cgtggctgcctcgaccggtggtggttgtcggcgcggccgcccgccacgtgcccgctctgc
cgctgccggctcctgcagagcccgtcggcggcggcggacgacggcgacggcgacggcgag
gaggattcggactcggacatggtgatgttcatggcgtacctgcgaagcagtagcacctgg
ctctag
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integrated database retrieval system
