Oryza sativa japonica (Japanese rice): 4344339
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Entry
4344339 CDS
T01015
Name
(RefSeq) RINT1-like protein MAG2L isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4344339
Membrane trafficking [BR:
osa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
4344339
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
4344339
NCBI-ProteinID:
XP_015647791
UniProt:
A3BNK3
LinkDB
All DBs
Position
7:join(29407875..29408106,29408240..29408350,29409255..29409367,29409520..29411529)
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AA seq
821 aa
AA seq
DB search
MASPRPPPASLRSFLDAHFASPEDLASAPALAELLRRECVGLDASLRRLEAQLASVSASW
LARSAGARASLRRIRSRGGGFGVEEDDGEETLRSAELPALVQEIHRIDAIRLYAEAALQL
EAFVGNLEDATFSIVRQASKLNLSSVFRPASNEMQWKQEKLLQAVDAMRDIELELLRIST
NRPQWTNLIMAVDSRVDKTLAILRPKALTDYRALLAALGWPPSLSSPDAANNKYSEIPNP
LILMNEANKEKYSQSFLALCALQHAQANCEARQCQAKGASASMSDSKYFDKTAACFDNGL
WAIDELVQPIASRLEYHFAKWSEQPEFIFALVYKIARDFMGGVDDILQPLIDRARLVGLS
AKESWVTGMVKMLLGYLERQIFPVLVTSYQATDDKFEVHSSWMHLNDLMITFDKRMQLLA
DSGIQKIASISEGLSRSLSVFSIYSEHSDWLHMWAGVELNSAQHKLKSEMEDEINWSYSI
KELGLQEITSNFLLSTREDYKAPTISEFVVKTASAMIERGHALPNRGLRIQYNRSSSVQF
LSDFFLVLRERCEALQLTNTALEDDSLLKASFAINAARYCEYVLREWDDDIVFLEMGAHR
KHVDEGQGQGHKHSAQHPCSFFGDEIAFLAKLGTDYLEQIMSSVLLEFEDLSWDYVQNIG
LPNEQIHPVDEVLDEENLGVSPGFVASLEVVRDRTTKLMLHLNSKDFLDLWRSIAEGLDY
FIYSSIRWGELTFSDQGVVQLRVDTKALLHIFRPFCLRPEAFFPFISDSLRLLAMRKTDA
RYLLEVLKNAKENDSCLRQQGLQHVNASQAMKILGSKRSDG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccgcggccgccgccggcgagcctgcggagcttcctggacgcgcacttcgcc
tcccccgaggacctcgcctccgcaccggcgctcgctgagctcctgcgccgcgagtgcgtg
ggcctggatgcatccctccgccgcctcgaggcgcagctcgcgtccgtatccgcctcctgg
ctcgcgcgctccgccggcgctcgcgcatctctccgccgcatccgctcccgaggcggggga
ttcggagtggaggaggatgatggcgaggagacgctgcggagcgcggagctgccggcgctt
gtgcaggagatccatcggatcgacgccattcgactctatgcggaagctgctctacagttg
gaagcttttgttggtaacctagaagatgcaacgttttccatcgttagacaggcctcaaag
ttgaacttgtcctcggtatttaggccagcatctaatgaaatgcaatggaagcaagaaaag
ttgctccaggctgttgatgccatgagggatattgaactagagttgctacggatcagcacg
aataggccacaatggaccaatcttatcatggctgttgattctagagtggacaaaacccta
gcaattttgagacctaaagcactaacagattatcgagctctacttgcagcacttggctgg
ccaccttccttgtcttcaccagatgcagcaaataataagtactcggaaattccaaacccc
ctcatcttaatgaatgaggcaaataaagagaagtattcacaaagttttctagcactgtgt
gctctgcaacatgcgcaagccaactgtgaagcgcgtcaatgccaagcgaaaggagcaagt
gctagcatgtcagattcaaagtactttgataaaactgctgcatgctttgataatggactt
tgggcaattgatgagttggttcagcctattgcttccaggttggaatatcattttgctaaa
tggtctgaacagccggagttcatttttgcccttgtttacaaaatagcaagagattttatg
ggtggtgtggatgatatattgcagcctttgattgatcgagcaagacttgtgggattgagt
gctaaagagtcttgggtaactggaatggtgaaaatgcttctaggttaccttgagaggcaa
attttcccagtccttgtcacatcttatcaggctactgatgacaaatttgaagtacattcc
tcatggatgcacttgaatgacctgatgattacttttgataaaagaatgcagttgcttgca
gattcaggaatacagaagatagcttcaatttctgaaggcctgtccaggtccttatctgtc
ttttccatatatagcgagcattctgattggcttcacatgtgggctggtgtagagcttaat
tctgcacaacataagctcaaatctgagatggaggatgagataaattggtcatatagtatt
aaagagcttggtctacaagagatcactagtaattttcttctgtctacaagagaagattac
aaagctccaacaatttctgaatttgtggtcaaaactgcatctgctatgattgaaagaggc
catgctctgccaaataggggattaaggattcagtataacagatcctcttcagtccagttc
ctgagtgatttctttcttgtcttacgtgaacgatgtgaagccctacaactgacaaataca
gctttagaagatgattctttactaaaagcttcatttgcaattaatgctgctcgatattgt
gaatatgttcttcgggaatgggatgacgacatagttttcctggagatgggtgcccatagg
aaacatgttgatgaaggccagggacaaggccacaaacacagtgcccaacatccatgttct
ttctttggcgatgaaatcgccttcttggctaaattggggaccgattatctggaacagatt
atgtcttccgttctgctcgagtttgaagatctatcctgggactatgtccaaaacattgga
ttgcccaatgagcagatccatccagttgatgaggtcctggatgaagaaaatctcggagta
tctcctggatttgttgcctctctagaagttgtgagagacagaaccaccaaactgatgcta
catcttaattcgaaggatttccttgatctgtggaggagtatagcagaaggcctcgactac
ttcatctacagcagcatacgatggggggagttgacattctctgaccaaggagttgtacag
ctaagagtcgatacgaaggcccttctccacatctttaggcccttctgtttaagacctgaa
gccttttttccattcataagtgattccctgaggctgttagccatgagaaagacagatgca
cgatacctgttggaagtgctcaagaatgccaaggagaatgacagttgcctgaggcaacaa
ggactgcaacatgtaaatgcaagccaagctatgaaaatcttaggtagcaaaaggtctgat
ggataa
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