Oryza sativa japonica (Japanese rice): 4344356
Help
Entry
4344356 CDS
T01015
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4344356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4344356
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
4344356
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
4344356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
4344356
NCBI-ProteinID:
XP_015645249
UniProt:
A0A0N7KP35
LinkDB
All DBs
Position
7:join(29488626..29488832,29488933..29489010,29489081..29489179,29490597..29490659,29490740..29490901,29490998..29491111,29491383..29491445,29491551..29491847,29492413..29492574,29492700..29493029)
Genome browser
AA seq
524 aa
AA seq
DB search
MASARATDPLASRDPPTLPSYLPPPPPPPLPSPSPHHRLLPAPMAPILLHLHPAFLAQMD
SRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPRRATATVL
TYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESAKVPLM
RFRFSGISVDFTYAQLPVIDASEAIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPNA
QKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIFA
HWNWQIPVSLHGQPTNCRRPDGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALT
KEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRFNLILKLESIG
VECDPDSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHS
KLTMSIVRSSQLPKSLYSHSVYTPYIPQYMLGYQTPTDYSGAAG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcgagggccactgacccgctcgcctcgcgcgatcccccaaccttgccctcg
taccttcctccgcctcctcctcctcccttgccctcgccatcgccccaccaccgtctcctc
cccgctcccatggccccgatcctcctgcacctccaccccgccttcctcgcccaaatggac
tcccgccggaccacctccctcctccagtttttgaaggacgaggggggcatcccgtcgccg
gaggcggacaagaagagggagcaggtcatccgcaagctcaacaagattgtgatggactgg
gccaaggtggtggcgtacgagcagagggtgcccccaaggcgagcaaccgctaccgttttg
acctatggatcatacacgttaggggctcatggacctgaatctgacattgatgcactatgt
gttggtccttgtattgcaacactgcagtaccattttttcattgttctgaggcaaattctt
gaagacaggccagaagtatcagaactgcagactgtcgaaagtgctaaggttccattgatg
cgatttagattcagcggtatttctgttgattttacatatgctcagcttccagttatcgat
gcatcagaggctataattacatctaatcctcatttgctccaaaaacttgattcgctgagt
tggagaagtttgtctggagttcgtgttaacgaacaaatcgtccagttagtaccaaacgca
cagaagtttcaaattctgttgcggtgcatcaagctatgggctaagaggcgaggaattcac
tgccatttgctcggcttcttcgctgggattcatttagcgattcttgcagcttatgtttgt
cagagatatccatatggcaccatcaatggtctgttcaccatattctttgatatatttgct
cactggaattggcaaattccagtaagcttgcatggtcaaccaactaattgcaggcgtcct
gatgggtctttcatgcccatactgttgccttgtactccaccggagttttgcacatccaat
atgacaaaaggcaccttcaagaaaattagagaagagcttatgcgtggttatgctttgacc
aaggagccatggaggcatgattttgagtgggtctggctttttgcaccgtttccatatgct
acaaaatacgaagaattccttcgaattgctctatgtgccccaacgtctgaagagctacgc
gattgggctggttgggtgaagtcccgcttcaaccttatcctcaagctggaaagtattggt
gttgagtgtgacccagattccacagaggaagttgatcatacagtcttcgagccaagcatt
gtatgccactggggcctcatatataaaacaagcacccatattgatattagctcactggga
gaagatttcatgaaggatgtcatcaatgatgtgtatggcaaggtgaaaggtacacattca
aagctgacaatgtccatcgttaggtcatcacagcttccgaaaagcttgtacagccactct
gtgtacactccatacattcctcaatatatgctgggctaccagactccgaccgactacagt
ggcgcagctggctag
DBGET
integrated database retrieval system
