Oryza sativa japonica (Japanese rice): 4344480
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Entry
4344480 CDS
T01015
Name
(RefSeq) U-box domain-containing protein 4
KO
K27970
U-box gene family group I [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344480
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4344480
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
U-box type E3
4344480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Arm_2
V-ATPase_H_C
zf-Nse
KAP
Motif
Other DBs
NCBI-GeneID:
4344480
NCBI-ProteinID:
XP_015650497
UniProt:
Q0J8I1
A0A0P0XB34
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All DBs
Position
8:join(558438..558707,559466..559579,559696..561726,561848..561907)
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AA seq
824 aa
AA seq
DB search
MENFSPRTLLNSILRITVLTSDGSTARPKPIQKYCQNVCDISSIVSPLIEDLCESPEEQL
NEVLRELGTAINRASGLIGNWQQTTSKIYFIWQIESVISDIQGCSLQLCQLVNSLLPSLT
GRACTCIEKLQDINYENMFDLVKESSLELVETDTTSPENLSRLSSSLSLSTNLEFYMEAV
SLENLRARAMRSENREEMDLADKMIPLVNYMHDHLLRETQLLSINGVPIPADFCCPLSLE
LMSDPVIVASGQTYERVYIKLWLDEGFTICPKTRQRLGHSNLIPNYTVKALIANWCESHN
IRLPDPMKSLKLNFPLAASALQDSSTTGSSPLHPTVAAKGNIPGSPEADLYMRSLNRASP
PHSVVHQNSHAHVNRAGHEASIKQSSENANGSASDVSRLSLAGSETRESSLEERNAGSIG
QTSEQSIEEAFQASNLDRDSHDHVGSSSVNGSLPNSGQLDAECDNGPSERTNYSSDASGE
VTDGPSASSAPQREHLIPSRLADVRSRGQFVRRPSERGFPRIISSSSMDTRSDLSAIENQ
VRKLVDDLRSDSVDVQRSATSDIRLLAKHNMENRIIIANCGAINLLVGLLHSPDSKTQEH
AVTALLNLSINDNNKIAIANADAVDPLIHVLETGNPEAKENSAATLFSLSVIEENKVRIG
RSGAIKPLVDLLGNGTPRGKKDAATALFNLSILHENKARIVQADAVKYLVELMDPAAGMV
DKAVAVLANLATIPEGRTAIGQARGIPALVEVVELGSARGKENAAAALLQLCTNSSRFCS
IVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactgtcttaacc
tccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatgtgtgtgat
atctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaagagcaactc
aatgaggtgttaagggagcttggcactgctattaacagagcttcagggcttattgggaac
tggcaacagacaaccagcaaaatatattttatatggcagattgaatcagtaatctcagat
atccagggatgttctctacagctgtgccagcttgttaactctctattaccttctttgact
ggccgtgcatgcacatgtattgagaaactccaagacataaattatgaaaacatgtttgat
ctggtaaaggagtcttcattggagctagttgagacggacacaacaagtcctgagaatctg
tcgagactatctagttcattgagtttgtcaactaacctggaattttacatggaagctgtt
tcccttgagaatctcagagcaagggcaatgcggagtgagaaccgtgaagaaatggatctg
gctgacaagatgatccccctggtcaactatatgcatgaccaccttctgagggaaacacaa
ctgcttagcatcaatggggtgcccattcctgcagatttttgctgcccgctgtccctagag
ctgatgtcagatcctgttattgtagcatctggtcagacatatgagcgggtttatatcaag
ttatggcttgatgagggttttactatctgcccgaagacacgccaaagacttggtcactcc
aatttaattccaaattacaccgtgaaagctttgatagctaattggtgcgaatcacacaac
attaggcttcctgatcctatgaaatccttgaaattgaacttccctttggctgcgtctgct
ctccaggattcgagcaccacaggaagcagccctctacatcctactgtcgctgctaagggt
aatattcctgggtccccggaagctgacctttatatgagaagcttgaatagagcatctcct
ccacacagtgtagtccatcagaattctcatgcgcatgtgaaccgtgctggtcatgaagcc
tccattaagcaatcttcagaaaatgctaatggttctgcatcagatgtttcaaggttatct
cttgcaggttctgaaacaagagagtctagtctggaagaaagaaatgctggttctatcggt
caaacttcagaacagtcaattgaggaagcatttcaagcatctaatttggacagggattca
catgaccatgtgggtagttcttcggtgaatggtagccttccaaatagcggtcaacttgat
gcagaatgtgacaatgggccaagcgaaaggacaaattacagtagtgatgcatctggagaa
gttacagatgggccttcagcatcttctgctcctcagagggagcatctaatcccttctaga
ttggctgatgttcgtagtagaggccaatttgttcggcgaccatctgaaaggggtttcccc
agaataatatcttcctcatccatggatacacggagtgatctttccgccatcgagaatcag
gtccgcaagttagttgatgatttaagaagtgattctgtagatgttcaaagatcagcgaca
tcagatatccgccttttagctaagcacaacatggagaacaggatcatcattgcaaactgt
ggagctataaacttgctggttggtcttcttcattcgccagattccaaaacccaagagcat
gccgtgacagcccttctgaatttgtcaatcaatgataataataagattgccattgcaaat
gctgatgctgttgaccccctcatccatgtccttgagactgggaaccctgaagccaaggag
aattcagcggctacattattcagtctctcggttattgaagaaaacaaagtgaggattgga
agatccggtgccatcaaacctctcgtcgacctactaggaaatgggacccctcgaggaaag
aaagatgcagctactgcattgtttaatttatccatattacatgagaacaaggcgcgtatt
gtgcaggctgacgctgtgaagtacctagttgaacttatggaccctgctgctggaatggtt
gacaaagctgtggctgttttggcaaaccttgctaccataccagaagggaggacagcaatt
ggtcaagcgcgtggtattccagcccttgttgaagttgttgaactcggttcagcaaggggg
aaggaaaatgcggctgcagcattgcttcagctatgtacaaacagcagcagattttgcagt
atagttcttcaagagggtgctgtgcctcctctagttgcattgtcacagtcaggcacgcca
cgggcaagagagaaggcacaggctcttctcagctactttcgcagccaaaggcacgggaat
tcagcaaggagatga
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