KEGG   Oryza sativa japonica (Japanese rice): 4344498
Entry
4344498           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K22611  squamous cell carcinoma antigen recognized by T-cells 3
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4344498
   03036 Chromosome and associated proteins [BR:osa03036]
    4344498
Spliceosome [BR:osa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    4344498
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    4344498
SSDB
Motif
Pfam: HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N RRM_1 HAT_Syf1_CNRKL1_C TPR_14 UTP6_C TPR_19 Lsm_interact ARM_TT21_5th TPR_CcmH_CycH Mad3_BUB1_I xRRM
Other DBs
NCBI-GeneID: 4344498
NCBI-ProteinID: XP_015650553
UniProt: Q0J8G3 Q6ZCC0
LinkDB
Position
8:complement(join(712335..712552,713004..713160,713478..713570,713655..714041,714647..714721,715378..715501,715585..715724,715796..715885,716146..716190,716809..716934,717030..717164,717858..718343,718431..718488,718620..718747,719101..719355))
AA seq 838 aa
MATPMEEDLPGAEAEAAGPAPPPAAATGGDGDGENPAPAPASPFSDSDSDSDDGGEGGDA
ADELRIQALEQALQEQPLDYESHVQYIQCLRKSGKIEKLRAAREEMNKYFPLTPKMWQEW
TKDEASLRPESFEDIEKLYERGVQEYLSVRLWRDYLDFVEENDKSVSQCSPSGLTKMRNL
FERAITAGGLHVTDGSKLWEAYREYEMAILTIIDDDDEEKAKQVQRIRVLFHRQLSVPLV
DMESILAEYKSWEAEQGNANDPTSNFDGVPSNVVAAYKKATEMYNVRKQYEDQLSNADAS
DDDKLEEFLKYIKFEESSGDPARVQVLYERAVAELPVSTDLWMGYTSYLDKTLKVPAVLK
SVYQRATRNCTWISELWVRYLLSLERIRASEEELRHVFEQALQCSFPSIKEYLEIYLTRV
DSLRRRMADGLDFQLIRQTFMDATEFLSPQMGTEDLLLLHAYWAKLERTLGNDLAAARGV
WENTLKKSGSVLEVWQHYIAMEIETEHIHEARSLYKRCYTKRFSGSGSEEICHAWIRFER
ECGTLEDYDLAVKKVNPRLKELMMFKAQQEVKVDTHVVPKETTGSDFSQKRKSSKIPTKQ
QPPAKKKKDNPPKSAVLSDDHGSKEQISTGHVKTGEVSGEKTQASMEVNLVDGSRRENTA
SKESKSNFYSDKCTAYMSNIDLTANEEHIRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVD
FSDNEHLEAAIRKNKHKLLAKKVSVARSDPSKGKKNREAGSFSKDQATSGDRGETAEFAN
RPDKEIPKDKPTITGKNTFAAPRSVVKPLGWTQKDEKSDVGAEELKSNEEFRNLLLKK
NT seq 2517 nt   +upstreamnt  +downstreamnt
atggcgacgcccatggaggaggacttgccgggggcggaggcggaggcggcggggcccgcg
ccgccgcccgccgcagccaccgggggcgacggcgacggcgagaatcccgccccggctccc
gcttccccgttctcggactccgattcggactccgacgatggaggggagggcggggacgcc
gccgacgagctccgcatccaggccctggagcaagctctccaggagcagcctctcgactac
gagtcacacgtccagtatatacagtgtttgaggaagtcgggtaagatcgagaagcttcgt
gcagcaagggaagagatgaacaagtatttcccactcacacctaagatgtggcaggaatgg
acgaaagatgaggcttcattgaggcctgaatcttttgaggatattgaaaagctctatgaa
cgtggagtgcaggaatacttgtctgttcggctatggcgcgattaccttgattttgttgaa
gagaatgataaatcagtgtcccaatgttcaccatctggcctcacaaaaatgaggaatttg
ttcgaacgtgctattactgcagggggattgcatgtgacagatggtagcaagctatgggaa
gcatacagggaatatgaaatggccattctaaccatcattgatgacgatgacgaggaaaag
gcaaagcaagtacagcgcatacgtgttctctttcaccgccagttatctgttcctctggtt
gacatggaatcaatacttgctgagtataagagctgggaagccgagcaaggtaatgcaaat
gacccaacctccaattttgatggtgttccctcaaatgttgtagcagcctacaaaaaggcc
actgagatgtacaatgtgcggaaacaatatgaggatcaactgagtaatgcggatgcatct
gatgatgacaaattggaggagtttctgaaatacatcaaatttgaggagtcttcaggtgac
cctgctcgtgttcaagttttgtatgaacgagctgttgcagagcttcctgtttcaactgat
ctatggatgggatacacgagttacctggacaaaaccctgaaggtacctgctgttctcaaa
agtgtttatcagagggccacaagaaactgtacttggatcagtgaactatgggttcgttat
ttgttgtcattggaacgcattcgtgcatcagaagaagaattgcggcatgtctttgagcaa
gctctccagtgttcttttccaagcataaaagagtatctcgaaatttatcttactcgagtt
gatagtttaagacggaggatggcagacggcttggatttccaactgatcaggcaaacattc
atggatgctactgagtttctttcaccccaaatgggaacagaggatttattgcttttacat
gcatactgggccaaattagagcgtactcttggaaatgatctagctgcagctcgtggtgtt
tgggaaaatactctcaagaaaagtggttctgttttggaagtctggcagcactacattgca
atggagatagaaaccgagcatattcatgaggctaggtcactttataagcgctgttatacc
aaaaggttttctgggtctggatcagaggagatatgccatgcgtggataagatttgaaagg
gagtgtggcacgttagaagattatgaccttgctgtaaaaaaggttaaccctcgtttgaag
gagcttatgatgttcaaggcacagcaggaggttaaggttgacactcatgttgtccccaaa
gaaactacaggaagtgatttctctcagaaaagaaaatcaagcaaaatccccaccaaacag
cagcctcctgctaagaaaaagaaagacaacccaccaaaaagtgctgtgctatctgatgat
catggatcaaaggaacaaattagcaccggtcatgtaaaaactggagaggtctcaggggag
aagactcaggcatctatggaagtgaatctggtggacggcagccggagagaaaatacagct
tcaaaagaatcaaagtcgaacttctacagtgacaaatgcactgcttacatgtcaaacata
gacttgacagcaaacgaagagcacatccggcgtttcttttctgatattggtggtgtgaca
gcaataaggttgctgagggacaagttcaccaaaaaatcaagggggattgcatatgtggat
ttttcagacaatgaacatcttgaggcagcaattagaaaaaacaaacataaactgcttgca
aagaaagtaagtgttgctcgttcagatccaagcaagggcaagaaaaaccgtgaagcagga
tctttctccaaagaccaagctactagtggcgatcgtggtgaaacggcagaatttgccaat
aggccagacaaggaaattcccaaagataaacccacaatcacagggaagaacacctttgct
gcaccacgatctgtggttaaacctcttggatggacacaaaaggatgaaaaatcagatgtg
ggcgcagaagagttaaaatcaaatgaggagttcagaaaccttttacttaagaagtga

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