Oryza sativa japonica (Japanese rice): 4344608
Help
Entry
4344608 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344608
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4344608
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4344608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_2
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
vWA-TerF-like
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
4344608
NCBI-ProteinID:
XP_015650866
UniProt:
Q6YYC5
B9FYY5
LinkDB
All DBs
Position
8:join(2020420..2020587,2020726..2020810,2020977..2021117,2021274..2021387,2021501..2021598,2021702..2021781,2021895..2022000,2022112..2022239,2023032..2023173,2023276..2023332,2023505..2023591)
Genome browser
AA seq
401 aa
AA seq
DB search
MGGVIGALFRGGGHRREMHRAPMNQPGYGGGGENHRRAMLTKKYSYIPDNYQSLDQVTAA
LRDQGLESSNLILGIDFTKSNEWTGKRSFSGQSLHKIGSTPNPYEQAISIIGKTLAPFDD
DNLIPCFGFGDATTHDYNVFSFHPDNSPCHGFEEVLSCYKKIVPHLRLSGPTSFAPIVEA
AVDIVDRSGGQYHVLVIVADGQVTRSVDTSDNDLSPQERRTVDSVVMASSYPLSIVLVGV
GDGPWEDMQKFDDKIPARQFDNFQFVNFTSIMSRSTTQQQKESAFALAALMEVPIQYKAT
MELGILGRSTGKAKRIMPAPPPLPSAAGRQPSLRREDSAAATAAAAPPSPREDQVCPICL
TNAKDLAFGCGHMCCRECGESLTKCPICRQTIRSKLRLYSG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtgatcggagcgttattccgcggtggtggtcaccgtcgtgagatgcacaga
gcgccgatgaaccagccgggatacggcggcggcggcgagaaccaccggagggcgatgctg
accaagaagtactcgtacatacctgacaactaccagtctctcgatcaggtgacagcggct
ctgcgagatcaagggctcgagtcgtcgaacctgatacttggcatagacttcaccaagagc
aacgaatggacagggaagcgttcgttcagtgggcagagcctgcacaagataggcagcaca
ccaaatccatatgagcaagccatcagcatcatcggcaagacattggcacctttcgacgat
gataatctcatcccatgctttggcttcggcgacgcaaccacacatgactacaatgtgttc
agcttccatcctgacaactcaccctgccatggattcgaggaggtcctatcatgctacaag
aagattgtgccacacctcaggctatctgggcctacctctttcgcgccgatcgtcgaggcg
gccgtcgacattgttgacaggagtggaggacagtatcatgttcttgtcatcgttgctgat
ggacaggtgactaggagtgttgatacaagcgataatgatctgagcccccaggagaggagg
acagtggactccgttgtcatggcaagctcctaccctctatccattgttcttgttggagtt
ggagatggcccatgggaagacatgcagaagttcgacgacaagatcccggctcgccagttc
gacaactttcagtttgtgaacttcacgtcgatcatgtcgaggagcacgacgcagcagcag
aaagagtcggcgttcgccttggcggctctcatggaggtgcccatccaatacaaggccacc
atggagctcggcatcctaggccggtcgacggggaaggctaagaggatcatgcctgctccg
ccgccgctgccgtcggcggcggggaggcagccatcgctgaggagggaagacagcgccgcc
gccaccgctgccgccgccccaccgtcaccaagagaggatcaagtgtgcccaatctgcctg
accaatgccaaggacttggcatttgggtgtggccacatgtgctgcagggaatgtggggag
agcctgaccaaatgcccaatttgtcgacagacgattcggtccaagctgaggctgtactca
ggatga
DBGET
integrated database retrieval system
