Oryza sativa japonica (Japanese rice): 4345168
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Entry
4345168 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K24755
WD repeat-containing protein 76
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4345168
03036 Chromosome and associated proteins [BR:
osa03036
]
4345168
03400 DNA repair and recombination proteins [BR:
osa03400
]
4345168
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
4345168
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
4345168
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
4345168
DSBR (double strand breaks repair)
Other DSBR factors
Others
4345168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_HPS5
Ge1_WD40
bMG1
Beta-prop_AT5G49610-like
Motif
Other DBs
NCBI-GeneID:
4345168
NCBI-ProteinID:
XP_015648987
UniProt:
A0A0P0XDW5
Q6YS10
LinkDB
All DBs
Position
8:complement(join(11184397..11184628,11184713..11184811,11186124..11186527,11187237..11187875))
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AA seq
457 aa
AA seq
DB search
MASPPDAALTDYERLREENIRRNDAILASLRRKASELSAAIQSSSSSKRPKKQPPPPRAT
PIPVVLRRSLRTRGLPPSTSTSSSSAASPPAPESPPEAPCSTRLSSSLASAILAAASASP
AAPPPVRDDGFDAGAELVLRPSHVRRVVPDRILSVRVLPLVDRTVVAAGNKLGNVGFWDV
DGGAVAGADGVFEYLPHRGPVGAIVSHPATPQKIYSCCYEGEICLMDLEKENFNMIYLTD
YPIFSLCQAPNSPSSLYLAEGNDLKLFDERMGKVSATWNLHDNRINSIDFHPENTYMLAT
SSTDGTACMWDLRNMKEKEPESLKVLEHGRSVQSAYFSPSGRMVATTSLDDTVRIFSVDD
FGNSSIMKHNNKTGRWLSTFKAIWGWNDTDLFIGNMARAIDIILVDLNGSSLLAMNNARL
ESEHMTAIPGRFSAHPYKVGHLACASSGGKVFLWTRA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgccggacgccgccctcaccgactacgagcgcctccgggaggagaacatc
cgccgcaacgacgccatcctcgcctccctccgccgcaaggcctccgagctctccgccgcc
atccagtcctcctcctcgtcgaagcgccccaagaagcagccgccgccgccgcgcgcgacc
ccgatccccgtcgtcctccgccgctccctccgcaccaggggcctccccccctccacctcc
acctcttcctcctccgccgcctccccgcccgcgcccgagtcccctccggaggcgccctgc
agcacccggctctcctcctccctcgcctccgccatcctcgcggccgcgtccgcctcgcca
gccgcgccgcctcccgtccgtgacgacggcttcgatgccggggcggagctggtgctgagg
ccctcgcacgtgaggagggtggtgccggacaggatactgtcggtgcgggtcctgccgctg
gtggaccggaccgtggtggcggcggggaacaagctggggaacgttgggttctgggacgtg
gacggcggcgccgtggcgggtgcagatggggtgttcgagtatttgcctcacaggggccct
gtgggggcaatcgtctcacacccagctacgccgcagaagatttacagctgttgctatgag
ggtgaaatttgtcttatggaccttgagaaagagaactttaatatgatctatctgactgac
tatcctattttctcactttgtcaagcgccaaatagccccagctctctatatcttgctgaa
ggaaatgatctgaaactttttgatgagaggatgggtaaggtgtcagccacatggaattta
catgataatagaatcaactcaatagattttcatccagagaacacatatatgcttgccaca
agttcaacggatggaactgcttgtatgtgggatttgagaaacatgaaagagaaggaacca
gagagcttgaaggtccttgaacatgggagatctgttcagtctgcttatttttcacctagt
ggccgcatggttgcaactacaagcctggatgatactgtccgaatttttagtgtggatgac
ttcggcaactcgagcataatgaagcacaataacaagaccgggagatggctttctactttc
aaggcaatctggggctggaatgacactgacctgtttattggaaacatggcgcgggcaata
gatatcattttggttgatctgaatggcagtagcctcttagctatgaacaacgcacgtctc
gagagcgaacacatgacggccattccgggccggttctctgcacacccatataaagttggc
catcttgcttgtgcaagctctggtggcaaggtgtttctttggaccagagcatga
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integrated database retrieval system
