Oryza sativa japonica (Japanese rice): 4345285
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Entry
4345285 CDS
T01015
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00040
Pentose and glucuronate interconversions
osa01100
Metabolic pathways
Module
osa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
4345285
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
4345285
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
4345285
NCBI-ProteinID:
XP_015649423
UniProt:
Q6Z8X3
Q0J6E5
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All DBs
Position
8:complement(join(14472278..14472496,14472570..14473088,14473185..14473361,14473556..14473696,14473793..14473960))
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AA seq
407 aa
AA seq
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MEARLRLLVVVVVVAGHCAAVASAAGNSSVVGYHGDPTFNVRNYGAKGNGQTDDSKALMT
AWKAACAATGAVTLVLPPGTYYIGPVQFHGPCSKATTMTFLMQGTLKAATDLKRFGNDWV
EFGWVNHLIVSGQNGAAFDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNKNMVVQNVASV
NSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIERSNGVSIADTTIATGDDCISIGQ
GNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTK
SNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGTATTQVAV
LLKCGVPCQGVVLQDVDLRYKGNGVSSSKCENVRAKYAGFQNPKPCP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggctgcggctgctcgtcgtcgtcgtcgttgttgccgggcactgcgccgcc
gtcgcgtccgccgccggtaactcgtcggtggtggggtaccacggggacccgacgttcaac
gtcaggaactacggcgctaaggggaacggccaaaccgacgacagcaaggcgctgatgacg
gcgtggaaggcggcgtgcgcggcgaccggggcggtgacgctggtgctcccgccggggacc
tactacatcgggccggtgcagttccatggcccctgcagcaaggccaccaccatgaccttc
ctcatgcaggggacgctcaaggcggcgaccgacctgaagaggttcggcaacgactgggtc
gagttcgggtgggtgaaccacctcatcgtctccggccagaacggcgccgccttcgacggc
cagggcgccgcctcctggcccttcaacaagtgccccatccgcaaggactgcaaagtcctc
cccaccagcgtgctgttcgtgaacaacaaaaacatggtggtgcagaacgtggcgtcggtg
aacagcaagttcttccacatggcgctgctgcagtgcagcggggcgaagatcagcggggtg
aagatcagcgcgccggagagcagcccgaacacggacggcatccacatcgagcggagcaac
ggggtgtccatcgcggacaccaccatcgcgacgggcgacgactgcatctccatcgggcag
gggaacgacaacatcgacgtggcgcgcgtccactgcgggccggggcacggcatgagcgtg
ggcagcctcggccggtacgtcggcgagggggacgtcacgcggatccacgtccgcgacatg
accttccacggcaccatgaacggcgtccgcatcaagacgtgggagaactcccccaccaag
agcaacgccgcccacatgctgttcgagaacctcgtcatgaacgacgtccagaaccccatc
atcatcgaccagaagtactgcccctactacaactgcgagcacaagttcgtgtccggggtg
acgatcaaggacgtgcagttcaagaacatcaaggggacggcgacgacgcaggtggcggtg
ctgctcaagtgcggggtgccgtgccagggcgtcgtgctgcaggacgtcgacctgcggtac
aaggggaacggcgtctcgtcgtccaagtgcgagaacgtcagggccaagtacgccggcttc
cagaaccccaagccgtgcccgtag
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