Oryza sativa japonica (Japanese rice): 4345375
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Entry
4345375 CDS
T01015
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4345375
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4345375
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Spc24
Motif
Other DBs
NCBI-GeneID:
4345375
NCBI-ProteinID:
NP_001409472
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All DBs
Position
8:complement(join(16711597..16711659,16711760..16711819,16711908..16712200,16712322..16712478,16712562..16712909,16713008..16713138,16713378..16713843,16714386..16715093))
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AA seq
741 aa
AA seq
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MAPPPLHLFSPSPRPPSPTPPPWLHGPHVPSTSVSPPDPATEAPPAPKQHRGPRPAPRNP
GSAKPLTAGVPGGRTRRAVLGIIRKVRSLELSDPRTPSPNGGGGSSSSSTATARVPFHLP
IHPPPPEREEEEEKKGIRRAVPWAAARDEETKVVLRREKKTRVPTRAETELEAGELERLR
RAARGKERWARAKKAGITDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTG
GLVVWTRGGIHFVYRGSSYLENAKRHRDFVNYNEELSPVTSNNPTSQGKYWSKDETLTND
NDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFKTPFR
QCPPGVRPALADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKV
GIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERESQVHDQQAK
EEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTTENNFRIQLEAKKHRLEK
ELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEH
VLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFT
TSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSMKYFAQERKKSIDELKRE
LRNVTWEIRKLNHDTEQSWTA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacctcccctgcacctcttctccccgtccccgcggccgccgtcgccgaccccg
ccgccgtggctccacggcccgcatgtcccctcgacgtccgtctccccgccggaccccgcc
accgaggcccctccggctccgaagcagcaccgtgggcccagaccggcgccaagaaacccc
ggctccgccaagcccctcaccgccggcgtccccggcggccgcacccgccgcgcggtcctc
ggaatcatccgcaaggtccgctccctcgagctctccgacccgcgcacacccagccccaat
ggtggtggtggtagtagtagcagtagcaccgcgaccgcgcgcgtccccttccacctcccg
atacatccgccgccgccggagcgggaggaggaggaggagaagaaggggattcgcagggcg
gtgccgtgggccgcggcgagggacgaggagaccaaggtggtgctgcggcgggagaagaag
acgcgggtgccgacgcgcgcggagacggagctggaggccggcgagctggagcggctgcgg
cgggcggcgcgggggaaggagcggtgggcgcgggccaagaaggccgggatcaccgacgag
gtggtggaggaggtgcgggggcagtgggcgaagggccaggagctcgccggcgtgaggatc
gtggagccgctccggcgatgcatggaccgggcaagggagattcttgagattaaaacagga
ggcttagttgtttggacaagagggggcatacattttgtgtacagaggaagcagttaccta
gaaaacgcaaagcggcatcgtgactttgttaattataatgaggaactttccccagtaaca
tctaacaatcctacatcccaagggaaatattggagtaaagatgaaactttaaccaatgat
aatgatgaagctgatgataaggacgacaaacctatcaagggaacactatatgaaagagaa
gtcaacagactactggacagtttgggccctcgatttatcgattggtggtggaacacacca
ttgcctgttgatgctgatctccttcctgaggttgtccctgacttcaagactccatttaga
caatgccctcctggtgtgagaccagcactagcagatgaggagctgacctacctgcggaag
catgcacggcctttgccaacacattttgtcctaggtagaaatacaaaactgcagggtttg
gctgctgctatactaaagctttgggaaaagagccttatagcgaaggttgcagtgaaagtg
ggtatccaaaataccaatcatgaacagatggccagaaatcttaagcgtcttacaggagga
actgtcatattgaggaacaaggattatattattatatatagaggcaaagattttcttccc
ggtggcgttgctgaatcagttattgaacgggagtctcaggtacatgaccagcaggcgaaa
gaagaggaggctcgattaaagatggctgactcacttcaaatgattgttggactatcatcg
gagagaagttatgtgggaactttcagagagtatcaggatttccatgatagccatgcacgt
agaacaactgaaaacaacttcagaattcaactagaggcaaagaagcatcgattggaaaag
gaactgaaagaccaggaatggagactttccatgcttaccaagaagattgaaagatcaaac
caagtgctggcaaagcttcatagttcttggagcccttcaaagaaagatggagacagagaa
ctcttgacagaggaggaaaggaggatattccgaaaaattggcctaaaaatggatgaacat
gtgctgcttgggagacgtggtgtctttgaaggcgtaattgaagagattcatcaacactgg
aaacataaagaggttgtgaaagtaattaccaagcagaaccaagccagccagatcacgtac
acatctatgatgcttgaggttgagacaggaggcacattaatagcaatagagaggttcact
accagccatgccataatactttaccgaggaaagaattatcgtcggccaacaaaatcagca
cccagtaatctcctgacaaaaagagaagcattacaaagatcaattgaggttcagcgacga
gggtcaatgaaatacttcgctcaggagaggaaaaagtccattgatgaattgaagagagaa
ctgaggaatgtgacatgggaaatcaggaagctaaaccatgatactgaacagtcttggaca
gcatga
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