KEGG   Oryza sativa japonica (Japanese rice): 4345419
Entry
4345419           CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4345419
   04120 Ubiquitin mediated proteolysis
    4345419
  09126 Chromosome
   03083 Polycomb repressive complex
    4345419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4345419
   04121 Ubiquitin system [BR:osa04121]
    4345419
   03036 Chromosome and associated proteins [BR:osa03036]
    4345419
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    4345419
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     4345419
   Cul7 complex
     4345419
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     4345419
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     4345419
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 4345419
NCBI-ProteinID: XP_015649631
UniProt: Q8GVW5 Q6ZDI9
LinkDB
Position
8:17760730..17761239
AA seq 169 aa
MAATADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAK
VVEYFKKHAAVTPKPATEAVAADKAKREEELKSFDAEFVDVDRTMVFELILAANFLNAQD
LLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcggcgacagcggacaacggcgaaaagatgatcctcctgatcagctcggacggcgag
cgttttgagctgtcggaggcggcggcgagtcagtcaaagacgttatcccacatgatcgag
gatgactgcaccgacaatggggttcccctccccaacgtcaccgccgtcgttctcgccaag
gtggtcgagtacttcaagaaacacgccgccgtcacccccaagccggccacagaagccgtc
gccgctgataaagcgaagagggaggaggagctcaagagcttcgacgccgagttcgtcgac
gtcgacaggacgatggtgttcgagttgattttggctgcaaacttcttgaacgcgcaggac
ctgctagatctgacctgccagcacgcggcggacttgatcaaagacatgtcggtggaggag
gtcagggaggtgttcaacatcaccaatgacttcacgccagaggaggaggcggaggtccgt
aaggagaacgcttgggcttttgacaactag

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