Oryza sativa japonica (Japanese rice): 4345578
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Entry
4345578 CDS
T01015
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4345578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4345578
Spliceosome [BR:
osa03041
]
Complex A
U1 snRNP components
U1 related factors
4345578
Complex B
4345578
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
4345578
NCBI-ProteinID:
XP_015650047
UniProt:
Q6ZA70
LinkDB
All DBs
Position
8:complement(join(20050222..20050473,20050966..20051543,20051627..20052301,20052384..20052774,20053590..20053742,20053848..20054101,20055144..20055600))
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AA seq
919 aa
AA seq
DB search
MAAVAPPPDGLDPPPATPPTAAAGTPPLAVPATNTPPNPATTPTPLTPNPNPSPTLPPPP
MSTPPVVAPPMHSFAPSFRPLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQPPGV
PHVMPPGAVRPPAMYAPQPGVYLQQPGAALPPGMPRYPGPYPMMRPGFPPRPMPPVGVMP
LQRPPIIPGIRGAPPVVPPTARPPTPAVTPPDKPPTAVYVGKIAPTVDNEFLLSLLRLCG
PVKSWKRTQNPSSGKPVSFGFCEFESAEGILRATRLLNKLSIDGQELVVNINDATKEYLK
KHVEEKKKAQEKTKEMEDGGGSGTTAVTGNELSKPVSDETETGTGDAGDKGNEENPKKFG
IVTEEDSKADKDVAEKISSMIEEWLKTRPPPPPPPVEQSADISSKHKNGEYSVDVTKNDS
EDKSGTGSDKRAVNETERIETGSPDKRKERERDKEKRDKDKELERHERERERERVRRDRE
KDIKYKEVERLYKERLKEWEFREREKEYQRQHEKEREKDRERERKREIMKQEDDSDEEDN
RKRRRRSSGTLEERKRRRLREKEEDLADKLREEEEIAEARRRAVELQQQADEAAAAAAAA
AVVAESATVMEVDGDDGKERDAQDKPAVVDVGNNDAFANGVDSGVNNGKDNIGDDKNMTP
GEISDTKHNTSAPAKKLGFGLIGSGKRTSVPSVFAEEDDEDNDDKRARPLVPIDYSTEEL
QAVQANSSTGQPNIVAAAEFAKRILVTKDDKSDVEKDRSWRSSDRTNQRDRDRNDQDVGR
TSDERREKTHDREKDKQDKPKSENKNILDAKQLIDMIPRTKEELFAYDINWAIYDKHELH
ERMRPWIAKKIIEFLGEEESTLVDYIVSCTKDHVQASKMLELLQSILDVEAEMFVLKMWR
MLIFEIKKVETGLSGRAKA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtagcgcctcctcccgacggcctagacccgccgccggcgacgccccccacc
gccgccgcgggcaccccgccgctcgccgtccccgccaccaacacgccgccgaaccccgcg
acgactcccaccccactcacgccaaaccctaaccctagcccgacgctgcccccgcccccg
atgtccacccctccggtggtcgcgccgccgatgcactccttcgccccctcgttccgcccg
ctcggcgccccgcccccgcccccgccaccgcagcaggtgcaggtgcaggtgccgccgcag
tacggcggcgtgccgaacccggggtacccgatggcgcagcagatgcagccgccgggggtc
ccccacgtgatgccgccgggcgccgtgcggccgcccgccatgtacgcgccccagcctggc
gtgtacctccagcagccaggcgctgctcttcctcccggtatgcctcgctaccctggacca
taccctatgatgcgccctggctttccgccacgcccgatgcctccagttggtgttatgccg
cttcaacgaccaccaattattcctgggattcgtggtgcacctcctgtggttccccctact
gcccgaccacctactccagctgttacacctcctgacaaaccgccaactgcagtttatgtt
ggcaagattgctccaacagtggacaatgaatttctcctttcacttctccgtctttgtggc
cctgtcaagagttggaagcgtacgcagaatccaagtagtggaaagcctgtatcatttggc
ttttgtgagttcgaatctgccgaaggcatccttcgtgcaacgcggctgctcaataaattg
agcattgatggacaagaacttgtggttaacattaatgatgccaccaaagagtacctgaag
aaacatgttgaagaaaagaagaaagcacaagaaaagaccaaagaaatggaagatggaggt
ggtagtgggactactgctgtcactggaaatgaattgtcaaagcctgtttctgatgaaaca
gagacagggacaggagatgctggtgataagggcaatgaagaaaatcctaagaaatttggg
attgttacagaggaagattctaaggctgataaggatgttgctgaaaaaattagtagtatg
attgaagagtggttaaagactagaccaccaccgccacctcccccagttgaacaatctgct
gacatctcttccaaacacaagaatggagagtatagtgtagatgtgacaaaaaatgattct
gaagataagagtggcactggaagtgataaaagggcagttaatgagaccgaaaggatagaa
actgggtctcctgataagaggaaggagagagagcgtgataaggagaagcgggacaaggat
aaagaacttgaaaggcatgaacgcgagcgagagcgagaaagagtcaggagagacagagag
aaggatattaagtataaagaagtggagaggttgtacaaggagcgcctcaaggagtgggaa
tttagagagagagaaaaagaatatcaaagacaacatgagaaggaacgagaaaaggacagg
gaacgtgagcgcaaaagggagatcatgaagcaggaagatgatagtgatgaagaggacaat
aggaaaagacgacgaaggagcagtggcacacttgaagagcggaaaaggaggcggctgcgt
gaaaaggaggaagacttagcagacaaattaagggaggaggaagaaattgctgaagcaagg
aggcgagctgtagagttgcaacaacaagcggatgaagcggctgcagcggcagcggcagcg
gcagtggtggcagaatctgctacagttatggaggttgatggcgatgatggaaaggaaaga
gatgcacaagacaaaccagctgttgtggatgttggtaacaatgatgcctttgctaatggt
gttgattccggtgttaataatggtaaagataacattggtgatgacaaaaacatgacacct
ggtgaaatttcggataccaagcataataccagtgctccagcaaagaaacttggttttggt
ctgattggctctggcaagcggacatctgtaccttcagtttttgctgaagaggatgacgaa
gataatgatgataagcgggcaagacctttagttcctattgattactcaacagaggaactg
caagctgttcaggccaattcttctactggccaaccaaatattgtagcagctgctgaattt
gccaagcgcatattggtaacaaaggatgataaatctgatgttgagaaggataggagttgg
agatcaagtgatagaacgaaccaaagggatagagatagaaatgatcaagatgttggtcgc
accagtgatgagagaagggaaaagacacatgaccgagagaaagataagcaagataagcca
aagtctgagaacaagaatattttggatgcaaaacaattaattgacatgattccgaggaca
aaggaagagctttttgcctatgatattaattgggcgatatatgacaagcatgagttgcat
gagagaatgaggccctggattgcaaagaagattattgaatttctgggtgaggaagaatca
actttggtggattacatcgtctcatgcaccaaagaccatgtccaggcatcaaaaatgttg
gagcttctacagtcaatcctggacgttgaagctgaaatgtttgtccttaagatgtggagg
atgcttatatttgagatcaagaaagtcgaaacaggactatcagggagagcaaaggcatga
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