KEGG   Oryza sativa japonica (Japanese rice): 4345910
Entry
4345910           CDS       T01015                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4345910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4345910
   03041 Spliceosome [BR:osa03041]
    4345910
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     4345910
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4345910
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    4345910
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35 BRAP2
Other DBs
NCBI-GeneID: 4345910
NCBI-ProteinID: XP_015650552
UniProt: Q6Z8U4 A0A0P0XHD9
LinkDB
Position
8:complement(join(24455861..24456406,24456623..24456792,24456871..24456970,24457765..24457928,24458650..24458690,24458806..24458873))
AA seq 362 aa
MGKAEARSREHGGGGGGGSGSAGKIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHT
SQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIFVGGLPQ
ALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGA
KVEIKKAEPKKSSNPPPSSHGSASRSAYGRDSRGHSSGNDYGGLANAYSNYNSGGFGPYR
NHGVYGGGSLSGYGGIGEYGVQYGRYYPGLGGSGSMPSFGYASRVGPYGGGFDGPYAGGN
LSGYRRGGDESFGGLSSSSFGGAMYGGAAYDPALGGYASGSTPERSRGNLAGGSGRYNPY
GR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggggaaggcggaggcgaggtccagggagcacggcgggggcggaggaggaggcagcggc
agcgcggggaagatcttcgtcggtggactgccccgtgacaccacggaagcggattttgtg
aagcattttggccagtatggagaaatagttgattcagtgataatgagggataagcacaca
tctcagccaaggggctttggctttattacatattctaaccctgccgttgtggatagagtg
atggatgatatccatgaattcaatggaaagcaagttgaaatcaagagaaccattccaaaa
gattctgtgcaatcaaaggatttcaaaactaaaaagatatttgttggtgggcttcctcaa
gcactgacagaagatgatttcaagcatttcttccagaaatatggccctgtggtggaccat
cagattatgcgtgatcatcaaaccaagcgttcacgaggctttggatttatagtttttagt
tctgatcaggttgtagatgatttattagcaaatggaaatatgattgatcttgctggtgca
aaggtggagatcaagaaagcagaaccaaagaaatcctcaaatccaccaccatcatcacat
ggtagtgcctctagatcagcatatggtagggattctaggggtcattcttctggcaatgac
tatggtggactggccaatgcttatagcaactacaacagtggtggatttgggccttatagg
aaccatggagtttatggtggtggtagtctcagtggttatggtgggataggtgaatatggt
gttcagtatggccgttactatccaggattaggaggatctggaagcatgccttcttttggt
tatgctagtcgtgttgggccgtatggaggaggttttgatggaccttacgctggtgggaac
ttaagtggatacaggcgtggtggtgatgagagctttggtggcctcagtagttctagcttt
ggtggcgctatgtatggcggcgcagcatatgatcctgcactaggtggttatgcatctggt
agcacacctgaaagaagcaggggaaatttggctggtggttcaggccggtacaatccatat
ggacgatag

DBGET integrated database retrieval system