Oryza sativa japonica (Japanese rice): 4346108
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Entry
4346108 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
4346108
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4346108
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4346108
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4346108
Peptidases and inhibitors [BR:
osa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
4346108
Ubiquitin system [BR:
osa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4346108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
bPH_9
Motif
Other DBs
NCBI-GeneID:
4346108
NCBI-ProteinID:
XP_015648994
LinkDB
All DBs
Position
8:complement(join(26434479..26434710,26435483..26436159))
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AA seq
302 aa
AA seq
DB search
MKQLMRTKLKFYLLHSTDSTKVEQISQSKDAVQGPLQIQKDKVQGKAVDFLPQNVLSDAK
VEGMDATRADSHIPEYLAPAPTFSPLREDDAQVALGIDVEKNGSAVRPEVSTEAKVTTSS
AKVTAKDKGKTRSSNIICNKAQDINSLASIEECLELHFEAETVELTCENCSKFAQKLNKS
VIQTRLSLLPPVLVIHLKRSLLQSDKVKGHVSFKEILDVGLFMDPSSVDKDNSIYRLASV
IEHHGHGKDSGHFVAYVRQSRPQQTNGSSSWFWASDTDIREVPLEEVLKCEAYLLFYERM
EG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgatgaggacaaaactaaaattttatttgcttcattctacagattctact
aaagtggaacagatctcacaaagcaaggatgctgtacaaggccctttgcagattcagaag
gataaggtccaaggaaaggctgttgatttccttcctcaaaacgtgttgtcggatgccaaa
gttgagggaatggatgcaacacgagcagattcccacattccagaatatcttgctccagct
ccaaccttttctccactaagggaagatgatgcacaggtagcattaggtattgatgtggag
aaaaatggcagtgctgttcggccagaagttagtactgaggccaaggtgaccacttcctca
gcaaaagttactgcaaaagacaaggggaaaactcggagtagcaatattatttgtaacaag
gcacaggatataaactctcttgcgtcgattgaggagtgcttggaactgcattttgaagca
gagacggtagaactgacctgtgagaactgctccaagtttgctcagaagctgaataaaagt
gtaattcaaacacgtcttagcctgctgccacctgtactagtcattcatctgaaaagatca
ttgttgcagtctgataaggtgaaaggacatgtgagctttaaggaaatccttgatgtggga
ctgttcatggaccccagctcagtggacaaagataattcaatttatcgtctagctagtgtt
attgagcaccatggccacggcaaagattcagggcactttgttgcttatgtgagacaaagt
cgtccgcagcagaccaatggctcttcctcatggttttgggcaagtgacaccgacatcaga
gaagtccctttagaagaagttctcaagtgcgaggcttaccttcttttctatgagaggatg
gaaggctga
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