Oryza sativa japonica (Japanese rice): 4346146
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Entry
4346146 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4346146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4346146
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
Use1
4346146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
4346146
NCBI-ProteinID:
XP_015650000
LinkDB
All DBs
Position
8:join(26753280..26753567,26754230..26754297,26754920..26754992,26755111..26755328,26755411..26755515,26755735..26755834,26755909..26756085)
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AA seq
342 aa
AA seq
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MFEGLKIDLFLIGIPYRPNRSCNTQSSLLWSIGFPFAGIRSSRPPPPSAGRFPFAAGSKI
RRRGLVGICPHPWTRLAPLLIAPPRVDALRAASSHKYVTTARELLEQLGAETTPEGISSV
SKAKISEYSEKIEALAARLAVPEHMVYFVFSSNKINLLFRTCSHNNSYRLYFSLIFFVQP
ENEVPVDENREVESSYEGEKPGSPISLSSGLRRRPIAHTDVGPSSHARKDRDIGAPIKLD
AEAQAHIEKHRKLQEDLTDEMVELARQLKESSLTMHQSVQETEKILDSTERAVEHSLAST
GRAATRAAEVYSLASKTTCFQWLLIFMMTCMFIMVVLLIRVT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggacttaaaatagacttattcctaatcggaatcccgtatcggcccaacaga
agttgcaatacccagtcatccctcctctggtcgattggattccccttcgctggcatccgc
tcgtccagaccaccgccgccgtccgccggccgcttccccttcgccgccgggagcaagatc
aggcggcgggggctcgtcgggatctgcccccatccatggactcgcttggcgccgcttctg
attgctccgcctcgcgttgatgcgctgcgcgcggcatcgagccacaagtatgtaaccaca
gccagggaattgttggagcagctaggagcagaaactactccagaagggatatcaagtgta
tcaaaagctaagataagtgagtattcagaaaagattgaagcattggctgcccggcttgct
gttccagagcatatggtttactttgttttttcttcaaacaaaatcaacttacttttcaga
acatgcagccacaataactcatatagattatacttttcattgattttttttgttcagcca
gaaaatgaagtgccagttgatgagaatagagaggtagaaagctcttatgaaggagaaaag
ccaggaagtccaatatcattatcatcaggattacgtaggagaccaatagctcacaccgat
gttggacctagcagtcatgcgagaaaggatagagacattggagcacctattaaattggat
gcagaagcgcaggctcacattgagaagcataggaagctacaagaagatctgactgacgaa
atggttgagttagcacgccaactgaaagagagcagtctcaccatgcaccaatctgttcaa
gaaacagagaagatccttgattccaccgagagagctgttgagcatagcttggcgagcact
gggcgtgcagccacgcgagcagcagaggtgtactcgttggcttccaagacgacatgcttc
cagtggctgctcatcttcatgatgacatgcatgttcattatggtggttttgctcatccgg
gtcacctga
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