KEGG T01015: 4346168

Oryza sativa japonica (Japanese rice): 4346168

Entry

4346168           CDS       T01015

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:osa00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4346168
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4346168
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4346168
Membrane trafficking [BR:osa04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    4346168
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    4346168
Exosome [BR:osa04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4346168

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank_2 Ank PH BAR Ank_3 Ank_4 Ank_5 PH_11 PH_8 ANK_LRRK2 PH_20 Reb1_MybAD PH_13 AAA_23

Other DBs

NCBI-GeneID:

4346168

NCBI-ProteinID:

XP_015648272

UniProt:

A0A0P0XIZ2 Q0J435

LinkDB

Position

8:complement(join(27018376..27018490,27018619..27019115,27020339..27020432,27020522..27020664,27021321..27021653,27021747..27021833,27021925..27022152,27022266..27022397,27022481..27022693,27023208..27023249,27023335..27023430,27023530..27023577,27023661..27023726,27024062..27024106,27024199..27024261,27024589..27024659,27024981..27025081,27025290..27025366,27026247..27026291))

AA seq 831 aa
MLFAKLDDSPMLRTQIQSLEESAEILRERCLKFHKGCRKYTEGLGEAYDGDIAFASSLET
FGGGHNDPISVAFGGPVMTKFTIALRELGTYKEVLRSQVEHMLNDRLLNFVDIDLHDVKD
ARKRFDKASLLYDQVRDKYLSLKKGTRADITTAIEDELHNARSSFEQARFNLVTSISHIE
AKKRFEFLEAVSSTMDSHLRYFKQGYDLLHQMEPYINQVLAYAQQSRERANKEQASLVER
MHEYKKQIDREIRLSNGLTDAHNGDGIQTIARSSHKMIEAVMQSASKGKVQTIRQGYLSK
RSSNLRADWKRRFFVLDSRGMLYYYRKQINRTPGGCSSHPRSIGNPTEHGSGLLSRLFSS
HYHGIIHDEKSVARHTVNLLTSTIKVDAEQSDLRFCFRIISPTKVYTLQAESAIDQMDWI
EKITGVIASLLSSQSPEQCFLLSPKSCGHDGSASESSSFTSQDLEPSMYDDLTLEKNTGN
GQHDVRGTHYHKTNMKPEKPIDLLRKVDGNIICVDCGSMEPDWASLNLGALLCIECSGVH
RNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNKFVNDVWEEVLPSSKNGESDDKLRAHG
LDTAWHFTVSKPKHSDPFSAKEKFIHAKYADKEFVRKYSMDEIQLAQQMWDNVTANDKRA
VYSLIVQSRANVNLVYGEMSYSSRSTTGRSSQQEHSSSPSDGSPVFFDCHSHEKVSPREP
LSPASTSSRVDDGEERCEGFSLLHLACHVADVGMVELLLQYGANVNAIDSRGRTPLHQCI
LKGRHIHAKLLLSRGANPQVADQDGRTALQCAIDGGTSDDEILVLLEDYTR

NT seq 2496 nt +upstreamnt +downstreamnt
atgcttttcgccaagctcgatgactcgcccatgctccgcacgcagatacagtcactggaa
gaaagtgctgaaattctcagggagagatgtttgaagtttcataaaggttgccgcaagtat
acggaaggattaggagaagcttatgatggagatattgcatttgcaagctcactcgaaaca
tttgggggaggccacaatgaccctataagtgttgcttttggtggacctgttatgaccaaa
tttacaattgccttgagagaactaggcacatacaaggaagtcctccgctcccaggttgag
cacatgctaaatgacagattgctgaattttgtggacattgatttgcatgatgttaaggat
gcacggaagcgtttcgacaaggctagcctcttgtatgaccaggttcgtgataagtacctg
tcactgaagaaaggcacacgagctgacataacaactgccattgaagatgaacttcacaac
gctagatcttcatttgagcaagcccgtttcaacctggtcacttcaatttcccatattgag
gcaaagaagagatttgaatttttggaggctgttagttcaactatggattctcatcttcga
tattttaaacaaggatacgacctattgcatcagatggagccatatattaatcaggttctt
gcttatgcacaacaatcaagagaaagggcaaacaaggagcaagcctctcttgtagagaga
atgcatgaatacaaaaagcagatagatcgggaaattcgtttatcaaatggtttgactgat
gcccataatggtgatggaattcaaacgattgctagaagttcacataaaatgattgaggca
gtgatgcagtcggcctcaaaaggcaaggtccagaccattcgtcaaggttacctctcgaaa
agatcttcaaacttgagagctgattggaaaagaaggttttttgtccttgatagtcgagga
atgctgtactactatcgcaagcaaattaataggacacctggtggttgttccagtcaccca
agaagcattggcaaccccactgaacatggttctgggttgctgagcagactattctcatct
cattaccatggcattatacatgatgagaaatctgttgcacggcatactgtaaatttgctg
acatcaaccattaaagtggatgcagaacaatcagatctgaggttctgcttcagaataatt
tcacccacaaaggtctacacactacaggcagagagtgcaatagatcaaatggattggatt
gaaaagattactggtgtcattgcatctttgcttagctcacaatccccagaacagtgtttt
ctgctaagccctaagagctgtggccatgatggcagtgccagtgaaagtagctcctttact
agccaggatctggaaccttccatgtatgatgacttaacattggaaaagaacactggaaat
gggcaacatgatgtcagaggcacacattatcacaagactaacatgaaacctgaaaaacca
attgatttgcttaggaaagttgatggcaatatcatttgtgttgattgtggttctatggaa
cctgattgggcatcattaaaccttggtgcacttctgtgcatagagtgctctggggtacac
agaaatctcggagtgcatatatcaaaggtaagatctctgacgcttgatgtcagagtgtgg
gaaccatctgtaatcaatctctttcaatcattaggcaacaagtttgtcaatgatgtttgg
gaagaagttttaccttcgtcaaaaaatggtgaatctgatgacaagttgcgcgctcatgga
ttagatacggcatggcacttcactgtcagcaagcctaaacactcagatcctttctctgcc
aaagagaagtttatccatgccaagtatgctgacaaggaatttgtacgaaagtatagcatg
gatgagattcagctagctcagcagatgtgggataatgtaactgcaaatgacaagagagct
gtatacagtctcatcgtgcaatcccgcgccaatgtaaatttagtttatggagagatgtcc
tatagttcacgttcgactactggaagatcatctcagcaagagcactcttcctcaccatct
gatggaagccctgtatttttcgattgccattcacatgaaaaagtttctcctagagagccc
ctttctcctgccagcacaagttcacgtgtagatgatggggaagaaagatgcgaaggtttc
tcgttgcttcatcttgcatgtcatgttgcagatgttggaatggttgaattacttttgcag
tacggagctaatgtaaatgcaattgattcaagaggccggacaccccttcatcagtgtata
ttgaaaggaagacacatacatgctaagcttctactctccaggggggctaatccacaagtt
gcggaccaagatggcaggacggcattacagtgtgccatcgacggtggaacaagcgacgac
gagattcttgtgttgttagaagattatactagataa

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