KEGG   Oryza sativa japonica (Japanese rice): 4346240
Entry
4346240           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related
  KO
K19045  E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4346240
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4346240
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4346240
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-ANAPC11 zf-RING_UBOX Prok-RING_1 zf_RING_Vps8_fungal zf-C3H2C3 zinc_ribbon_16 zf_RING_Vps8 zf-RING_Vps41 Prok-RING_4 PHD PHD_NSD RINGv
Other DBs
NCBI-GeneID: 4346240
NCBI-ProteinID: XP_015650586
UniProt: Q6Z9B8 Q6YT05
LinkDB
Position
8:join(27649493..27649672,27649775..27650084,27650203..27650303,27650958..27650999,27651101..27651222,27651292..27651400,27651647..27651700)
AA seq 305 aa
MDAAKDTTAAAADQNPTPNPPTAAAPPDDSAAAAAAGRRPFTSLTQEEADLALARVLQEQ
ERAYMMLSAHHGGDYAASDGGSYEFDEEGEGSDFEDEDGDGDGDGEALDEDEEVADADAD
AAGDPAELDPARYEDDEAFARALQDAEEREVAGRLMALAGLSDWRVMDHDDDDVDDDDDE
DDDDDDDDEDEDGDDPQDAWEDVDPDEYSYEELVALGEVVGTESRGLSADTLASLPSITY
RAQDKQDGNMEQCVICRVEFEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEVPTS
QDTRA
NT seq 918 nt   +upstreamnt  +downstreamnt
atggacgccgccaaggataccaccgccgccgccgccgaccaaaaccctacccccaaccct
cccaccgccgcagctccacccgatgactccgcggcggcggcggcggcggggagacggccc
ttcaccagcctcacccaggaggaggccgacctcgccctcgcccgcgtcctccaggagcag
gagcgggcgtacatgatgctcagcgcgcaccacggcggcgactacgcggcctccgatggt
gggagctacgagtttgacgaggaaggggaggggagcgattttgaggacgaggatggggac
ggggacggcgacggggaggcgctggatgaggacgaggaggtggccgacgcagacgcagac
gccgccggtgacccggctgagttggaccccgcgcggtacgaggacgacgaggccttcgcg
cgggcgctgcaggacgccgaggagcgcgaggtcgccggccgcctcatggcgctcgcgggc
ctcagtgattggcgagtgatggaccatgatgatgacgatgttgatgatgatgatgatgag
gatgatgatgatgatgatgatgatgaagatgaagacggggatgatccacaggatgcatgg
gaagatgttgatccagatgaatattcttatgaggagctggttgcattgggtgaagtagtt
ggtacggaaagcagaggcctctctgctgatacacttgcttcattaccttcaataacttat
cgagcacaagataagcaagacggcaacatggaacaatgtgttatttgccgtgtggaattt
gaggaaggtgaatcattggttgcacttccttgcaagcattcataccattctgaatgcata
aaccaatggctgcaattaaataaggtatgccctatgtgcagtgctgaagttcctacttca
caggacacccgggcatga

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