KEGG   Oryza sativa japonica (Japanese rice): 4346309
Entry
4346309           CDS       T01015                                 
Name
(RefSeq) vesicle-associated membrane protein 727
  KO
K08515  vesicle-associated membrane protein 7
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04130  SNARE interactions in vesicular transport
osa04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    4346309
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    4346309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4346309
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4346309
Membrane trafficking [BR:osa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    4346309
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4346309
SSDB
Motif
Pfam: Synaptobrevin Longin SRP-alpha_N
Other DBs
NCBI-GeneID: 4346309
NCBI-ProteinID: XP_015649386
UniProt: Q6YZI8 A0A0P0XJD1
LinkDB
Position
8:complement(join(28103955..28104098,28104185..28104247,28105099..28105219,28105319..28105520,28105628..28105823))
AA seq 241 aa
MNGNKQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFL
VDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDFLLED
RFSIAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEK
IELLVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFK
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaacggcaataagcagtccctgatatacagcttcgtggccaagggctccgtcgtgctg
gccgagcacaccgccttctccggcaacttcagcaccatcgccgtccagtgcctccagaag
cttccccccaacacctccaagtccacctactcctgcgatggccacaccttcaacttcctc
gtcgaccgcggcttcgtgtttctcgtcgttgcggatgaggccgttggaaggagcgtgccg
tttgtgttcctagatagggttaaggaagacttcatgcagcggtatggctccagtatcgac
gaggagggtcaacacccgctcgccgatgatgcagatgatgatgacttcctcttggaggac
cgatttagcatcgcctacaatcttgaccgggaattcggaccgaggctgaaggatcacatg
ctgtattgtattaatcatccagaggaaattagcaagctctccaaagtgaaagcacacctc
acggaggtcaaagggattatgatggacaacattgagaagatattggaacgtggagagaag
attgagcttttggtcggcaagactgaaaccttacaatcacaggctgacagcttccacagg
catggaagagagctcaggcgtaagatgtggcttcagaacctgaggtttaagttgatggtg
ggtggtgctgttgcggcgttgattctcttcctctggctgattatttgcgggggcttcaag
tgctag

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