Oryza sativa japonica (Japanese rice): 4346329
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Entry
4346329 CDS
T01015
Symbol
P0543D10.3, sodCp
Name
(RefSeq) superoxide dismutase [Cu-Zn], chloroplastic
KO
K04565
superoxide dismutase, Cu-Zn family [EC:
1.15.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4346329 (P0543D10.3)
Enzymes [BR:
osa01000
]
1. Oxidoreductases
1.15 Acting on superoxide as acceptor
1.15.1 Acting on superoxide as acceptor (only sub-subclass identified to date)
1.15.1.1 superoxide dismutase
4346329 (P0543D10.3)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Sod_Cu
SEEK1
DUF7382
Motif
Other DBs
NCBI-GeneID:
4346329
NCBI-ProteinID:
NP_001390634
LinkDB
All DBs
Position
8:join(28280360..28280609,28281039..28281100,28281213..28281252,28281987..28282082,28282191..28282222,28282327..28282402,28282483..28282536,28282969..28282994)
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AA seq
211 aa
AA seq
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MQAILAAAMAAQTLLFSATAPPASLFQSPSSARPFHSLRLAAGPAGAAAARALVVADATK
KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPH
FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELE
DDLGKGGHELSLSTGNAGGRLACGVVGLTPL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccatcctcgccgctgccatggccgcccagaccctcttgttctccgccaccgcc
cctcccgcctcccttttccagtccccttcctctgcccgccctttccactcgctccgcctc
gccgccggccccgcgggcgccgccgctgccagggcgctcgtcgtcgccgacgccaccaag
aaggccgtcgccgtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccag
gatgaccaaggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttcac
ggcttccacctccacgagtttggcgatactacgaatgggtgcatatcaacaggaccacat
tttaacccaaacaatttgacgcacggtgcaccagaagatgaagtccgtcatgcgggtgac
ctgggaaacattgttgccaatgctgaaggtgtagctgaggcaaccattgttgataagcag
attcctctgagtggcccaaattctgttgttgggagagcattcgttgttcatgagcttgaa
gatgatttggggaagggtggccatgagcttagtctcagtactggaaatgctggtgggcga
cttgcatgcggtgttgttgggctgaccccgttgtag
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