Oryza sativa japonica (Japanese rice) (RefSeq): 4346365
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Entry
4346365 CDS
T01015
Name
(RefSeq) uncharacterized protein LOC4346365
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4346365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4346365
03400 DNA repair and recombination proteins [BR:
osa03400
]
4346365
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.-
4346365
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
4346365
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4346365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
4346365
NCBI-ProteinID:
XP_015651249
UniProt:
B9G222
LinkDB
All DBs
Position
9:complement(244490..248922)
Genome browser
AA seq
452 aa
AA seq
DB search
MAAAEEAILQKRKKQAEEMLAPLPFPHLTAAEETPPNPETPISGEAVAVAVRRKERKRKN
EEAAGVGKEKKRKSREGPPAPEARRKERKRMLMPRQPSHDQIHGIQVQANPPPLAGGRDE
AYGRSSCKKIRVLSNREIIKMRIQLRKHQPLPQGIFDPEIIMASNSTQQDPNHSSPFGAF
FDQFCYKPTRQDRTPPLPRTPDLLVRPPPRDHLSSASSQLMTNHTCKINSTCKTTTFKTR
SGPNQGNTKVKEMARVNKERKPAPLLSRAEKRSDKYRRLPLDQLVPPPRSPHKLLQEKYA
SDPWKVIVICMLLNLTQGKQVRRKVKGFFKRYPDAQTAFSADPEKMAKYLAPLGLQRVKV
NRIQRFSKAYVEEEWTYITELCGVGKYAADAYAIFCAGRATEVVPADHKLVDYWKYVCFE
LPMIQQSQDMQEAGVTEMEHAVPKVEELAVCC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagaggaggcgattctgcagaagcggaagaagcaggcggaggagatgttg
gccccgttaccttttccccacctgacggcggctgaagagaccccgcccaaccccgaaacc
ccaatctcgggagaggcggtggcggtggcggtgaggagaaaggagcggaagaggaagaat
gaggaggccgcgggcgtggggaaggagaaaaagcgaaagagtagggaggggccaccggcc
ccggaggcgaggaggaaggagcggaagcggatgctgatgcccagacaaccatctcatgac
caaatccacggcatccaggtacaagcaaaccctcctccactggccggaggacgagatgaa
gcgtatggcaggagtagctgcaagaagatccgcgtcctgagcaaccgcgagatcatcaag
atgaggatacaattgaggaagcaccagccactacctcaaggcatttttgacccagagatt
attatggcttccaattccacccagcaggaccccaatcattcttcgccattcggcgccttc
tttgaccagttctgctacaaacccacccgccaagatcgcactcccccacttcctagaacg
cctgaccttctagtcaggccgccgcctcgggatcatctatcatctgcttcatctcagctc
atgacaaatcacacctgcaagatcaacagcacctgtaagacaacaaccttcaagacaaga
tcaggaccaaaccaaggaaatacgaaggtaaaagaaatggcaagggtgaacaaggaacga
aaaccagcaccgctgcttagccgtgctgaaaagaggtcagacaaataccgccgccttccg
ttggaccagctggtgcctccgccacgctcccctcataagctactgcaggaaaaatacgct
tctgacccgtggaaggtcattgtcatctgcatgctcctcaacttaacacaggggaaacaa
gtgaggaggaaagttaaggggttcttcaaacgatatcctgatgctcaaactgcatttagt
gctgatcctgaaaagatggccaagtatctggctcctctgggtttgcagcgtgtaaaagta
aacagaatccagagattctctaaggcgtatgttgaagaagaatggacctacattactgag
ctttgtggtgttggcaagtacgcagctgatgcttatgcaatcttctgtgcgggcagggca
acagaggtggtacctgcagaccataagttagttgattactggaaatatgtttgtttcgag
ttgcccatgattcagcaatctcaggacatgcaggaagctggagtgactgagatggagcat
gctgtccccaaggtggaggaattggccgtgtgctgctaa
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