Oryza sativa japonica (Japanese rice): 4346480
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Entry
4346480 CDS
T01015
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex isoform X2
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4346480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4346480
03036 Chromosome and associated proteins [BR:
osa03036
]
4346480
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
4346480
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
4346480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_SCAP
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
RMC1_N
CFAP43_N
Beta-prop_SPT8
WDR54
WD40_like
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
4346480
NCBI-ProteinID:
XP_015611482
UniProt:
A0A8J8YIG3
B9G290
LinkDB
All DBs
Position
9:join(7514382..7514534,7515651..7515929,7516014..7516283,7516372..7516962,7517051..7517194)
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AA seq
478 aa
AA seq
DB search
MEAPGSGSVPTAKRRRLVPRPPPVPLEVAGARGPYMPPLCIKSKNPSAKCYGDRFIPDRS
AMDMDMAYFLLTEPKKEKENTDMLSPAEEAYKRLLAEKLLNNRSRILAFRNKPPEPEGIV
QQLLYETLTSSQTKPARKCRHIPQSSERTLDAPGIVDDFYLNILDWGCKNVMSIALGNTL
YLWNSADGSIMDLVTIDEDDGPITSVSWSCDGQWIAVGLNSSDIQLWDTSSNRMLRTLHG
VHQSRVGSLAWNKNILTTGGMDGNIVNNDVRMRSHVVHIYRGHEDEVCGLRWSGSGQQLA
SGGNDNLVHIWDVSMASSNLSLGHNRWLHRFGDHLAAVKALAWCPFQSNLLASGGGGDDR
CIRFWNTHTGLCLNSVDTGSQVCGLLWNKNEKELLSAHGYVQNSLALWKYPSMVKLAELE
DHTARVLCLAQSPDGFTVASVAADETLRLWKIFETSEDAKPVFKTVNTGMFNSFSHIR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgggctccggctcggtcccaacggcgaagcgccgccggctcgtgccacgg
cctccgccggtgccgcttgaggtggccggcgcgagggggccgtacatgccgccgctatgt
attaaatccaagaacccgtccgcgaaatgctacggtgacagattcatacctgataggtca
gcaatggacatggatatggcatatttcctcctgacagaacctaagaaggagaaggaaaat
actgacatgctatcaccagctgaagaagcttacaagaggcttcttgccgagaaactcctg
aacaacagaagccggattcttgcattcaggaacaaaccaccagaacctgaaggaattgtg
caacagctattatatgaaactttgacttccagtcagacaaagcctgctaggaagtgtaga
cacataccccagtcttctgagaggacgttagatgcccctgggattgttgatgacttctat
cttaacatattggactggggatgcaaaaatgtgatgtccattgcgcttgggaacaccttg
tacctctggaattcagctgatggatctattatggaccttgtaacaattgacgaagatgat
ggtcccatcactagtgttagctggtcttgtgatgggcagtggattgccgttggcctcaac
tcttctgacattcagctgtgggacaccagctctaatcgcatgctgagaacacttcatggt
gtacaccaatcaagggttggttcactggcctggaacaagaacatactgacaactggtgga
atggatggaaacattgtaaacaatgatgtcaggatgagatcccatgttgttcatatatat
cgagggcatgaggatgaggtatgtgggttgagatggtcaggaagtggccagcaattggca
agtggtggcaacgacaacctggtgcacatatgggatgtatcaatggcatcttctaatcta
tctctaggtcataaccggtggcttcatagatttggcgatcatttagctgcagtgaaggcc
cttgcatggtgtccgttccagagcaatttgcttgcatctggtggtggtggagatgatcgg
tgcatcaggttttggaatacacacactggtttatgtttgaattctgttgatactggatca
caggtgtgcggactactctggaataagaatgaaaaggagctgctaagtgctcacggatat
gtacagaattcacttgcattgtggaaatacccttcaatggttaaattggcagaacttgaa
gaccacactgctcgtgttctttgcctggctcagagccctgatggatttacagtagcctct
gttgcagcagatgagactctaaggttatggaaaatttttgaaacttctgaagatgccaaa
cccgtattcaagacagtaaacactggaatgtttaacagtttcagccatatcagatga
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