KEGG   Oryza sativa japonica (Japanese rice): 4346491
Entry
4346491           CDS       T01015                                 
Name
(RefSeq) DNA-directed RNA polymerase 1B, mitochondrial isoform X1
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4346491
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     4346491
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    4346491
SSDB
Motif
Pfam: RNA_pol RPOL_N
Other DBs
NCBI-GeneID: 4346491
NCBI-ProteinID: XP_015612354
UniProt: Q84LK6 Q0J392
LinkDB
Position
9:complement(join(7802916..7803026,7803734..7803837,7803940..7804054,7804836..7804883,7805011..7805100,7805311..7805385,7805493..7805645,7806187..7806271,7808543..7808613,7808735..7808785,7809529..7809945,7810021..7810152,7810271..7810384,7811084..7811201,7811448..7811506,7811605..7811671,7811756..7811889,7811978..7812193,7813119..7814012))
AA seq 1017 aa
MPSSPTPATAPISCSPSPPLHLHLTARRQTLAPPMWRRLPARRLASALLSSSAPLPHPLH
RSLLLLLPAASQRLAPSQTLPRFASSSAAVAAESVSSEEVDELHHAIGEIARGDPSVSAP
APAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAML
RRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELV
GERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVR
IHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNS
KPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRR
YGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQR
DAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEK
PDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGR
AYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFT
ENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGS
CNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARA
RLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTL
TALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL
TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVD
TMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgccctcctccccaactccggccaccgcaccaatctcgtgttcgccatctcctcctctc
cacctccacctcaccgcccgccgccaaaccctagcgccccccatgtggcgccgcctcccc
gcccgccgcctcgcctccgccctcctctcctcctccgccccgctgccccaccctctccac
cgcagcctcctcctcctcctccctgccgcctcacagcgtctcgcgccgtcgcagacgctg
ccgcggttcgcgtcctcctccgccgccgtcgccgccgagtccgtctcctccgaggaggtc
gacgagttgcaccacgcgatcggggagatcgcccgcggggacccgagcgtctccgccccg
gctccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggcc
gaggctatggcggttccggcggcggggcaggaggggcataggaggaggtccgggagaggg
aagcactcggccgaggctatggcggtgcacggggtcgggtaccacaagtatgcgatgctg
cgccggcggcagatccagattgagacggaggcgtgggagcaggccgccgaggagtaccgc
gagctgcttgctgacatgtgccagcagaagctggcgcccaacctgccctatgtcaagtcg
ctctttcttggctggttcgagccactgcgagaccagatcattgccgagcaggagctcgtg
ggtgagcgcggcgcgcgggcctcccatgcccgctatttcaacatgctcccggctgatatg
atggccgtcatcaccatgcacaagctcatgggtctactcatgaccggtagcggcgatgga
agtgtccgagtcatccaggctgcgtgccagatcggcgaggcaatagaacatgaggttcga
atccacaaatttctagagaagacaaagaaaaaaagcaataaagaaatggataatgaagaa
gaaggaggtgattcagacattgccaaagaacaagagcgtctaagaaagaaagtcactgat
ctgatgaaaaagcaaaaaatacggcaagtaagaaatatagtaaagaagcaagataactcc
aagccatggggtcaagatgctcatgcaaaagttggtagtcgtttaattgagcttatgatt
gagacagcctacatacaaccacctgctagccaatcagcagatggtccacctgatatccgt
cctgctttcacacatgaaatgagaactgtggcaagagagcaacagaagagtagtcggcga
tatggtgtgatcaagtgtgatccgctggtccggcaagggcttgatagaacagcaaagcat
atggtcataccttatatgcctatgttaattccgcctatcagttggactgggtatgacaag
ggtgcacatttatttttaccatcctatgtgatgcgcacccatggagctagacaacagaga
gatgctgtcagaagagctccaagggaacaaatgcaatctgtgtttgaggccttaaatact
cttgggagcaccaagtggagggttaacaaaagagttcttagtattgtcgacagaatatgg
tcaagtggtggccggcttgctgacttggtcgatcgcactgatgttgctttaccagagaag
cctgacacagaagatgaagacaagttgaagaaatggagatggaccttgagagcagccaag
aaggaaaatagtgaaaggcactcccagagatgtgatgtagaactaaaacttgccgtagct
cgcaaaatgaaggatgaagatggtttctactatccacacaaccttgattttagaggccgt
gcttatccaatgcatccttacctgaaccacttgggttcagatctttgccgtggagttttg
gagtttgcagaaggtcgtccgcttggtaaatcaggcttgcgctggctaaagatacatcta
gcaaatttatatgctggtggtgttgacaagttatcgtatgatggccgaattgcattcacg
gagaatcacttggaggacatatttgactcagctgatagacctcttgaaggcaaacgatgg
tggcttggagctgaggatccattccaatgccttgcagtgtgcataaatctcactgaagct
ttaagaagcccctcaccagaaacgatgatctcacatattcctgtgcatcaggatggttct
tgtaatggcctgcagcactatgctgctcttggaagggataagttgggagccattgctgtg
aacttagttgccggggagaagcctgcagatgtttatactggaatagctaccagggtggtg
gaaattatgaagaacgatgcgctaaaagatcctgctacagatcctgatgcagcacgcgca
cgtctgctacttgatcaggttgacaggaaattggtaaagcaaactgtgatgacatctgtg
tatggtgtcacttatgttggagcacgtgagcaaataaaaagaagattaaaggagagagac
atgatttgtgatgattcagaactttttagtgcatcatgctatgctgctaaggttactctg
acagcacttggtgagatgttccaagctgcccgcagcattatgaactggcttggtgactgt
gccaaggtaattgcttgtgaaaatgaacctgtgagatggacaacccctcttggactccca
gttgttcaaccatatcgcaagcttgggaggcatcttattaaaacatcattacaagtcctg
actcttcaacgtgaaacagataaggttatggtgaagcggcagaggactgcttttcctcca
aatttcgtgcactcccttgacggttctcatatgatgatgaccgctgttgcttgcaaaagg
caaggactaaattttgcaggagtgcatgattcgtattggacacatgcttgtgatgttgat
acaatgaacaaaatactacgagagaagtttgtggaactctatgatacgcctatcctcgaa
aatttgttggagagctttgagaaatctttccctgaattaaaatttcctccattgccagag
aggggagattttgatctcacggatgtcctgggatccccatatttcttcaactaa

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