Oryza sativa japonica (Japanese rice): 4346616
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Entry
4346616 CDS
T01015
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 14 isoform X1
KO
K15156
mediator of RNA polymerase II transcription subunit 14
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4346616
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
4346616
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Med14
Motif
Other DBs
NCBI-GeneID:
4346616
NCBI-ProteinID:
XP_015611937
UniProt:
B9G2K1
Q6ENK5
LinkDB
All DBs
Position
9:complement(join(10367677..10368472,10369216..10370267,10370349..10371325,10371976..10372777,10373348..10373522,10374468..10374565,10375940..10377013,10378007..10378255))
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AA seq
1740 aa
AA seq
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MAEGELGQQTVELGAVVRRAAEESYLSLRELVEKSQDEGEGKGGAYGARQRSDSEKKIDL
LKFIARTRQRMLRLHVLAKWCQQVPLVNYCQQLGSTLSSHETCFTQTADSLYFMHEGLQQ
ARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLNASVRYKVLVTP
RPKEVSNVSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLEVLVGDKGGPIKLEERR
RFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRKTNVLRQGRWKDAIRSELVL
DSTTGQTGSAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKAGGSAESDSSPFIKIEARQD
MQIKCQHSSFILDPLTDKEANLSLDLCCIDVEQLILRAIASNRHTRLLDIQRQLSKNVQI
SQSPKDVILKRDVEIAKDPVKKTEQKDFADCCGNEVLQVRAYGQAYIGLGINIRSGRFLL
QSPENILPPSALLDCEEALNKGSITATDVFASLRTRSILHLFAATGSFFGLKVYEKSQGT
LKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDANDKTNTNACTKE
ALRFNKIDIGQIQISKSESNTNMFDAKLHALQNIGNCDDVMENRLPIQSGIEPLPLLPAC
SPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGVGTRANASIEGASS
AYSGSKFSPGVGLNSYLPSNLRHVQSTNAFSSSTVTKSSSIKLPSSNSNHELSSLSSPTE
HVIADGSKSLQLVPASKINGSINLITMGSDGASRKRSISDLFLNLPSLQGLKPSSPRKRR
RISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKH
AQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGSMSWDVRIND
PHFRELWELSTGSTTTSWGVGVRVANTSEMDSHISFDAEGVILTYSNVEPDSVQKLVSDL
RRLANARSFARGMRRLIGVKLNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRI
EAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFL
DCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQMNNIPTQGPLANGSSSTTMHHAPS
PANVAATHLGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSV
DMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGA
HLNSSAGTLQPAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGG
ASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFA
QLPELLKEILGSILKENEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFH
HQQQQQQAQNSAQEELAPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFL
KLIAWKKGFSQAHGDMATAQRARIEICLENHSGSVSDDITESTLAKSNVKYDRAHSSLEF
ALTFVLDHALIPHMNVAGGAAWLPYCVSVRLKYSFGESNHIAYLAMDGSHGGRACWLQYE
DWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggggagctggggcagcagacggtggagctgggcgcggtggtgcggcgggcg
gcggaggagtcgtacctctcgctgcgggagctcgtggagaagtcgcaggacgagggcgag
gggaagggtggcgcctatggcgcgcggcagcggtccgactccgagaagaagatcgacctg
ctcaaattcatcgcccgcacccgccagcgcatgctccgcctccatgtccttgccaaatgg
tgccaacaggttccattggttaattattgtcaacagcttggatcaactctctccagccat
gaaacatgtttcacacaaacagctgattcgctgtactttatgcatgaggggttgcagcaa
gctcgagctcctatgtttgacatcccttctgctttagaagtcatgcttacaggaaactat
caaagattgccattatgtatagaagatataggaagccaaaataaactttctccggatgaa
gagaagcgtgctttacagaagttgaatgcaagcgtgcggtacaaagttcttgtgactcca
agacccaaagaagtttctaatgtttcagtagctgatggaatagctgtttttcgtgtggat
ggagaatttaaagttcttcttacacttggttatcgtggccacttagatttatggaggatt
ttgcatttagaggtacttgttggtgacaaaggcgggcctattaagctagaagagaggagg
agatttgcacttggtgatgatatagaaagacgaatggcagtttctgagaatcccttcatg
gtgctgtatgccatacttcatgagttgtgcatctcacttgctatggacactatcattagg
aagaccaatgttcttcggcagggaaggtggaaagatgcaataagatctgagcttgtctta
gatagcaccacagggcaaactgggagtgctcctctaatgcagcttggtcaggatggggaa
tatgatttgagtggttctaggatacctggcctaaaaataaattactggcttgatgaaaaa
gctggtggctcagcagaatctgattcatcaccatttatcaaaattgaggccaggcaagac
atgcagataaagtgccagcatagttcgtttatacttgatcctttgacggataaagaagcc
aatctttctcttgatctgtgttgcattgatgttgaacagctcattttgagagcaattgct
tctaataggcacactcgtcttcttgatatccagagacagctgtccaaaaatgttcaaatt
tctcagtcaccaaaagatgttatcctcaaacgagatgttgaaatagcaaaggacccggtg
aagaaaacagagcaaaaggattttgcagattgttgtggaaatgaggtgcttcaagtgagg
gcctatggtcaagcatatattggtcttggaataaatatcaggagcggtcgtttcctcctc
cagtcgccggaaaacatcttacccccttctgcactgctagattgtgaagaagctctaaat
aaagggagtattacagctactgatgtttttgcaagcttaagaaccaggagcatcctccac
ctatttgctgctactggaagtttttttggccttaaggtttatgagaagtctcaaggtact
ctaaagattccaaaggacatattgcatggttcagacctgatggtgatgggatttccacag
tgtgcaaatgcctattatctattgatgcaacttgataaggacttcaggcctgtttttcat
ttgcttgagacacaatctgatgcaaatgataagacaaacacaaatgcatgcacaaaggaa
gctttgaggtttaataagattgatattggacagatacagattagtaaaagtgaatcgaat
acaaatatgtttgatgcgaagctgcatgccctacagaatatagggaattgtgatgacgta
atggaaaatagactccccattcaaagtggcattgagcctcttccactgctgcctgcttgt
tcaccatcgttctcttctgttgttgatgaagtttttgaatatgaacacggggctcttgct
gttccaaaccattctttgccgcaaactactttgcagtctacctctcatccaggttctctt
tctgttggttttcaaggagtaggtactagagctaatgcatcaattgaaggggcctcatca
gcttacagtggatcaaaattttctcccggggttggtttgaacagttatttaccaagtaat
ttgagacatgtacaaagtacaaacgccttttcctcaagcactgtaacaaaatcatcttca
atcaagttgccaagttctaattctaatcatgaactgagctcattgagctctccaactgaa
catgtgattgctgatggaagtaaatcacttcagctcgtccctgcaagcaagattaatgga
tcaatcaaccttatcactatgggctctgatggtgcatctagaaagcgttctatttcagat
ttatttctgaacctcccttcattgcaaggattgaaacccagtagcccaaggaagcgaaga
agaatatcagaatcaatggagagttggtctcctttgcaagcatattcatcagactcacaa
tcaagaacaagcctcacctacggaaatattctggctgaaagaaataattgtgtcccagca
actacatatgcttcggtgctactacatgtcataagacactgttcattgtccattaaacat
gctcaaataactgcccagatggattctcttgccattccatatgttgaagaagtgggctta
cgatcaccatcctctaatctttggctaaggttaccttttgctcgggatgattcttggaaa
cacatatgcttacgcctcggcaaggctggaagtatgtcttgggatgttaggataaacgat
ccacattttagggaactctgggagctaagtacaggaagcaccacaacctcatggggtgtt
ggtgttcgtgtcgcaaacacctctgagatggattcgcatatctcttttgatgcagaaggt
gttattttaacttacagcaatgttgaaccagacagtgttcagaagcttgtgtcagatcta
cgaaggcttgcaaatgcccgttcatttgcccgtggaatgaggagattgattggtgtcaaa
cttaatgacaagctagatgatgatcagacatctacggatataaagtcgcagcctgttaat
aagggtaatagtgatgctgcagacaggctatctgaacaaatgagaaagactttcaggatt
gaagctgttggcttaatgagcttgtggttcagttatggcacaatgcctatggtacacttt
gttgttgagtgggaaagtgctaagggaggctgcacaatgcatgtttctcctgatcagctt
tggccacacacaaagtttttggaggatttcgtgaacggtggtgaggtagcatccttcctg
gactgcattcggctgacagcagggcctttgcttgcccttgggggtgcaattcgtccagca
agaatgcctgtaacggtttcttctggatacaactccatgccaaagcagatgaacaacatc
cccacccagggaccattagcaaatggttcatcatcaacaaccatgcatcacgcaccttcc
cccgcaaatgttgctgccacccatttgggaagtcataatctccacactgctgcgatgctt
tccgctgctggacggggtgggcctggacttgttcctagttctttgctgccctttgatgtt
tctgttgtgctccgtgggccatactggatacgcattatatatcggaagaaattttctgtt
gacatgcgctgtttcgctggggatcaggtttggctacaaccagcaactcctcctaaagga
ggacctctggttggtggatcgttgccgtgcccacaatttcgaccattcataatggaacat
gttgctcagggtctaaatgctcttgaacccagtttcatgaatgctacacaggccggtgcg
catttaaatagcagtgctggaactctgcaacctgcacccaatgcaaatcgtgtaaacgcg
actcaaggtattggtatgtccaggcctgcttctggagttgctaaccatgtagcagccaat
ttgagtcgagcaggtaatgccatgttggcctcttcaggacttgcttcagggattggtggg
gcctctgtgcgactaacatctggagctaacctccctgttcatgtgaaaggagagctgaat
acagctttcattgggcttggggatgatggtggctacggtggtggttgggttcctttggca
gctctcaagaaggttttaagagggatcctcaagtaccttggagttctatggttgtttgca
caattgcctgaacttctgaaagagatactggggtcgattttgaaggaaaatgagggtgct
ctcttgaatttggatcaagagcaacctgcactccggttctatgtgggaggttatgtattt
gcagttagtgttcatcgggttcaattgcttctacaagttttaagcgtcaagcgattccat
caccagcaacagcagcagcaagctcagaacagtgcacaggaagagctagctccacctgaa
atcaacgagatatgtgattatttcagcaggcgtgttgcctctgaaccatatgatgcttcc
agagttgcttcatttatcactttgcttacactaccgatttcagtgctgcgagaattttta
aaactaattgcttggaagaaaggtttctcccaggctcatggggacatggccactgctcag
agagcccggattgagatttgtctggaaaatcattcagggtcagtttcagatgatatcaca
gaaagcactttggctaagagcaatgttaagtatgatagagcccacagttctctagagttt
gctctgacctttgtacttgatcatgctctcattcctcatatgaatgtagctggcggagct
gcctggcttccgtattgtgtatccgtacgactaaagtattcttttggggaaagcaaccat
atagcataccttgcaatggacggtagccatggtggcagagcttgctggttgcaatacgag
gactgggaaagatgtaagcagaaggtcgccagggcagtggagactgtgaatggctctgtt
gcggttggagaatcaggccaaggaagattgcgaatggtcgccgagatgatccaaaagcaa
cttcagctctgtcttcagcagctgagagatggtcctctttctgctggctcaactgcatca
tga
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