KEGG   Oryza sativa japonica (Japanese rice): 4346985
Entry
4346985           CDS       T01015                                 
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
  KO
K13148  integrator complex subunit 11 [EC:3.1.27.-]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4346985
Spliceosome [BR:osa03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    4346985
SSDB
Motif
Pfam: Beta-Casp Lactamase_B_6 RMMBL Lactamase_B Lactamase_B_2
Other DBs
NCBI-GeneID: 4346985
NCBI-ProteinID: XP_015651426
UniProt: B9G3F7 Q0J219
LinkDB
Position
9:join(18260910..18260934,18261017..18261203,18261308..18261380,18261817..18261934,18262052..18262125,18262247..18262383,18262915..18262978,18263346..18263411,18263714..18263783,18263859..18263963,18264493..18264634,18264996..18265092,18265592..18266113)
AA seq 559 aa
MAIECLVLGAGQEVGKSCVVVTFGGGKRVMFDCGMHMGHRDSRRYPDFDRLLADGAADYT
AAISCVVITHFHLDHIGALPYFTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHRGEE
EQYSYEDILRCMRKVIPLDLKQTIQVDKDLSIRAYYAGHVLGAAMIYAKVGDAAIVYTGD
YNMTPDRHLGAAQIDRLKLDLLITESTYAKTVRDSKHAREREFLKAVHKCVSGGGKVLIP
AFALGRAQELCILLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKNSYTVHN
PFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEVFKKWAPSEKNLVTLPGYCVAGT
IGHKLMSGKPTRIDIDKDTHIDVRCQIHQLSFSPHTDSKGIMDLTEFLSPSHVILVHGEK
PQMAFLKERIESELGMQCCYPANNETVSIPTSQNLKINATEKFIVSFCMDETENDPQKQN
LNFGGDMPQGCRTEGVAEGVLLMEKSKTPKILREDELLHSLGMETHFVHFEPLHPSSIEV
KHTGESAVQQSSLEHLDCE
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggccatcgagtgcctcgtgctaggggcggggcaggaggtggggaagagctgcgtggtg
gtcaccttcggcggcgggaagcgcgtcatgttcgactgcggcatgcacatgggccaccgc
gacagccgccgctacccggacttcgaccgcctcctcgccgacggcgccgccgactacacc
gccgccatctcctgcgtcgtcatcacccacttccatttggatcatatcggagcactgccg
tacttcaccgaggtctgcggttaccacggtccagtttacatgacgtacccgacaaaggct
ttagctccattgatgctggaagactatcggaaagtaatggtagatcatagaggagaggaa
gagcaatatagctatgaagacatcctacgctgtatgaggaaagttataccattggacctg
aagcagaccattcaagtagataaggacctttcgatccgtgcctattatgctggacatgtt
ctaggggctgcaatgatatatgcaaaagttggagatgctgctattgtgtacactggagat
tacaatatgacaccagataggcaccttggagcagcgcaaattgatcgtctgaagttagat
ctgttgataacagaatcaacatatgctaaaactgtgcgtgactcgaagcatgcccgagag
agggagttcttaaaagcagtccataagtgtgtttctggaggtggtaaagttctaattcca
gcatttgctcttggaagagcacaggagctatgcatactactggatgactattgggaaagg
atgaacctgaagattcctatttatttctcagctggtttaaccattcaagccaacatgtac
tacaaaatgcttattggatggactagccaaaagatcaagaacagctacacagttcataac
ccatttgacttcaagcatgtttgccactttgagcgttctttcattaacaatcctggtcca
tgtgtgctttttgcaacacctggtatgattagtggtggattttcccttgaagtgtttaag
aaatgggctccatcagaaaaaaatctggttacacttcctggatattgtgttgctggaacc
attggccataagttgatgtctggaaaacctaccaggattgacatagacaaggacacccat
attgatgtcagatgtcagatccatcaactgtcattcagtcctcatacagactcaaagggg
atcatggatcttactgaatttctttctcccagtcatgtaattctagttcatggcgaaaaa
cctcagatggctttcttgaaggagcggatcgaatccgagttggggatgcaatgctgttac
ccagctaacaacgagaccgtctctattccgacatcccagaacttgaaaataaacgccacg
gagaagttcattgtgagcttctgcatggatgaaactgaaaatgatccgcagaagcagaac
ctgaattttggtggcgacatgccacaaggctgcaggactgaaggagtagctgagggcgtt
cttctgatggagaagtccaagactccgaagattttgcgcgaggacgagctgcttcactcg
ctgggcatggaaacgcattttgtccattttgaaccactgcatccgtccagcattgaggta
aaacatactggtgagtccgcggtgcagcagagcagtttagaacatttagactgcgagtga

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